RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 A0A1W2PRD5 423 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 A0A1W2PRF3 423 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 A0A1W2PRM7 423 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 MAGEA13PA6NCF6 341 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 OR2AT4A6NND4 320 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 OGG1O15527 345 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 GPR137BO60478 399 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 IGHV4-59P01825 116 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 HCKP08631 526 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4L2P0CJ85 424 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4L3P0CJ86 424 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4L4P0CJ87 422 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4L5P0CJ88 424 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4L6P0CJ89 424 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4L7P0CJ90 424 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 RPL15P61313 204 aaKnown RBP12.45□□□□□ -0.42
VARS-223ENST00000474643 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
VARS-223ENST00000474643 OLFML2AQ68BL7 652 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 STUMQ69YW2 141 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 XAF1Q6GPH4 301 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4L9Q6RFH8 374 aaPredicted RBP12.45□□□□□ -0.42
VARS-223ENST00000474643 GDPGP1Q6ZNW5 385 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 LHFPL2Q6ZUX7 228 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 ZNF367Q7RTV3 350 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 CALHM1Q8IU99 346 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 SERPINA12Q8IW75 414 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 FGFRL1Q8N441 504 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 ZFP41Q8N8Y5 198 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DNAAF1Q8NEP3 725 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 GPR148Q8TDV2 347 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 SGCDQ92629 289 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 SPSB1Q96BD6 273 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 OPALINQ96PE5 141 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 PKIBQ9C010 78 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 CCDC90BQ9GZT6 254 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 PRDM13Q9H4Q3 707 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 ZCCHC4Q9H5U6 513 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 VCX3AQ9NNX9 186 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 ACOT13Q9NPJ3 140 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 RASL12Q9NYN1 266 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 DUX4Q9UBX2 424 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 MMP24Q9Y5R2 645 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.44□□□□□ -0.42
VARS-223ENST00000474643 MAGEB3O15480 346 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 PGA5P0DJD9 388 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 IL24Q13007 206 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 MLLT11Q13015 90 aaPredicted RBP12.44□□□□□ -0.42
VARS-223ENST00000474643 NCR3LG1Q68D85 454 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 DHRS7BQ6IAN0 325 aaPredicted RBP12.44□□□□□ -0.42
VARS-223ENST00000474643 ACP7Q6ZNF0 438 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 SLC25A26Q70HW3 274 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 MKXQ8IYA7 352 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 FAM185AQ8N0U4 392 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 SLAMF9Q96A28 289 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 RFT1Q96AA3 541 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 SMIM19Q96E16 107 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 DCTN5Q9BTE1 182 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 C1RLQ9NZP8 487 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 OR14J1Q9UGF5 321 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 ZNF281Q9Y2X9 895 aa12.44□□□□□ -0.42
VARS-223ENST00000474643 A0A1W2PPH5 198 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 MEIOCA2RUB1 952 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 CLPSL1A2RUU4 121 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 M0QZ24 198 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 NPFFO15130 113 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 NDUFA7O95182 113 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 LALBAP00709 142 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 TFF1P04155 84 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 SELLP14151 372 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 JUNBP17275 347 aaPredicted RBP12.43□□□□□ -0.42
VARS-223ENST00000474643 TPBGQ13641 420 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 DMKNQ6E0U4 476 aaPredicted RBP12.43□□□□□ -0.42
VARS-223ENST00000474643 LDLRAD3Q86YD5 345 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 ANGPTL6Q8NI99 470 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 WFDC12Q8WWY7 111 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 THRSPQ92748 146 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 GHSRQ92847 366 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 CEP19Q96LK0 163 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 DMRTB1Q96MA1 342 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 SPACA5Q96QH8 159 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
VARS-223ENST00000474643 IGKV1-27A0A075B6S5 117 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 IGKV1-9A0A0C4DH69 117 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 RFPL4AA6NLU0 287 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 RFPL4AL1F8VTS6 287 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 TIMM23O14925 209 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 SULT1B1O43704 296 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 NOS1APO75052 506 aaPredicted RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 PSG2P11465 335 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 RAB3AP20336 220 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 MPZP25189 248 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 PSMA1P25786 263 aaKnown RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 PPP3R1P63098 170 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 PRB3Q04118 309 aaPredicted RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 KLRD1Q13241 179 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 MED22Q15528 200 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 TRAM1Q15629 374 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 SYT6Q5T7P8 510 aaPredicted RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 ATPAF1Q5TC12 328 aaPredicted RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 ZNF788Q6ZQV5 615 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms