RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 HLA-DRB3P79483 266 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 IL24Q13007 206 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 KISS1Q15726 138 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 HAGHQ16775 308 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 AKIRIN2Q53H80 203 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 SLC25A53Q5H9E4 307 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 Q6ZS49 121 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 RD3Q7Z3Z2 195 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF429Q86V71 674 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 OR5AS1Q8N127 324 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 OR2C3Q8N628 320 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 GATSQ8NAP1 163 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 NOXO1Q8NFA2 376 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 GJC3Q8NFK1 279 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 OR1N1Q8NGS0 311 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 PTPMT1Q8WUK0 201 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 RTN4IP1Q8WWV3 396 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 EDARADDQ8WWZ3 215 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 C11orf40Q8WZ69 217 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 TSLPQ969D9 159 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 SPTSSAQ969W0 71 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 PINX1Q96BK5 328 aaKnown RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 ADAT3Q96EY9 351 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 ARHGAP5-AS1Q96IT6 56 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 C18orf12Q96KH6 178 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF2Q9BSG1 426 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 ST6GALNAC5Q9BVH7 336 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 PARD6GQ9BYG4 376 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 ACTR3CQ9C0K3 210 aaPredicted RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 WWTR1Q9GZV5 400 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 IL36GQ9NZH8 169 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 SERGEFQ9UGK8 458 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 CYP8B1Q9UNU6 501 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 WSB1Q9Y6I7 421 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 V9GYS6 101 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 OTOGQ6ZRI0 2925 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 SNRNP200O75643 2136 aaKnown RBP7.04□□□□□ -1.28
CCDC93-208ENST00000474546 C2orf16Q68DN1 1984 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 CSMD1Q96PZ7 3565 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 CACNA1EQ15878 2313 aa7.04□□□□□ -1.28
CCDC93-208ENST00000474546 KIF26BQ2KJY2 2108 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 SPAARA0A1B0GVQ0 90 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 hCG_1809904A0A1W2PP81 198 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 A0A1W2PR64 198 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 A0A1W2PRV1 198 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CLEC18AA5D8T8 446 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF724A8MTY0 619 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 SMAD9O15198 467 aaKnown RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 NME2P1O60361 137 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 DIRAS3O95661 229 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 LY86O95711 162 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 DDAH2O95865 285 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 HOXB2P14652 356 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PAX1P15863 534 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 ST6GAL1P15907 406 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CBR1P16152 277 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 GLRA1P23415 457 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 UCP1P25874 307 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PTGER4P35408 488 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 GPX4P36969 197 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 NDUFA6P56556 154 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PIGPP57054 158 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 TAS2R30P59541 319 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 SERF2P84101 59 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 POU3F1Q03052 451 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PRDX4Q13162 271 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 TMEM187Q14656 261 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 MPV17LQ2QL34 196 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 ACOT6Q3I5F7 207 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PLAC9Q5JTB6 97 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 TMEM211Q6ICI0 200 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 KMT5CQ86Y97 462 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 FAM219AQ8IW50 185 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 TMEM183AQ8IXX5 376 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF283Q8N7M2 679 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CLEC18CQ8NCF0 446 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 APCDD1LQ8NCL9 501 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 TMEM104Q8NE00 496 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 OR2G3Q8NGZ4 309 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 FAM213BQ8TBF2 198 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 OR51E1Q8TCB6 317 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 SLC37A2Q8TED4 501 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF721Q8TF20 911 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 MRPL24Q96A35 216 aaKnown RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PGAM5Q96HS1 289 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 BOD1Q96IK1 185 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 FAM210BQ96KR6 192 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 C1orf147Q96MC9 270 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 GNRHR2Q96P88 292 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PSMG3Q9BT73 122 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 SCRT1Q9BWW7 348 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 MRPL13Q9BYD1 178 aaKnown RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 OR8D2Q9GZM6 311 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 RIMS4Q9H426 269 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CHODLQ9H9P2 273 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 STARD5Q9NSY2 213 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 LYRM2Q9NU23 88 aaPredicted RBP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF701Q9NV72 531 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms