RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CLLU1OSQ5K130 101 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 WDR59Q6PJI9 974 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF322Q6U7Q0 402 aaPredicted RBP1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 LINC00523Q86TU6 105 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 OR4K2Q8NGD2 314 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 OR6K3Q8NGY3 331 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 OR51A7Q8NH64 312 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 DOK4Q8TEW6 326 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 PEX13Q92968 403 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 APOBEC3DQ96AK3 386 aaPredicted RBP1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 CENPNQ96H22 339 aaPredicted RBP1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 QKIQ96PU8 341 aaKnown RBP eCLIP1.35□□□□□ -2.193e-7■■■■■ 26.9
ECHDC1-213ENST00000474240 VAT1Q99536 393 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 KLF6Q99612 283 aaPredicted RBP1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 APOL4Q9BPW4 351 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 GABARAPL1Q9H0R8 117 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 TXNIPQ9H3M7 391 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 PRSS16Q9NQE7 514 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 TMEM38BQ9NVV0 291 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 DNAJC27Q9NZQ0 273 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 WDR19Q8NEZ3 1342 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 VWA8A3KMH1 1905 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 FBN1P35555 2871 aaKnown RBP1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 IGHV3-43A0A0B4J1X8 118 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 SLC5A10A0PJK1 596 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 ANKRD20A5PA0PJZ0 165 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 AKR7A2O43488 359 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 ALOX12BO75342 701 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 CRTAPO75718 401 aaPredicted RBP1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 HLA-AP01891 365 aaKnown RBP1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 RLN2P04090 185 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 SFTPCP11686 197 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 GTF2F2P13984 249 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 CFHR2P36980 270 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 GPR4P46093 362 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 RAB25P57735 213 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 RPL31P62899 125 aaKnown RBP1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 GBE1Q04446 702 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 CST6Q15828 149 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 BCL2A1Q16548 175 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 KRTAP25-1Q3LHN0 102 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF404Q494X3 552 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 CA13Q8N1Q1 262 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 Q8NDZ9 215 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 OR8S1Q8NH09 359 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 OR51Q1Q8NH59 317 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 TWIST2Q8WVJ9 160 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 TRIB3Q96RU7 358 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 C12orf4Q9NQ89 552 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 ANXA10Q9UJ72 324 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 SLC22A14Q9Y267 594 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 FADS3Q9Y5Q0 445 aa1.34□□□□□ -2.19
ECHDC1-213ENST00000474240 SETD1AO15047 1707 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 IGKV1OR2-108A0A075B7D4 117 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 ZNF729A6NN14 1252 aaPredicted RBP1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 OR2AT4A6NND4 320 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 F5H5P2 479 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 M0R1B8 84 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 SPOPO43791 374 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 DHRS3O75911 302 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 GUSBP08236 651 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 GZMAP12544 262 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 CD99P14209 185 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 GZMHP20718 246 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 DEKP35659 375 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 CBX5P45973 191 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 GPR176Q14439 515 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 HIKESHIQ53FT3 197 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 SETD3Q86TU7 594 aaPredicted RBP1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 OR6N2Q8NGY6 317 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 MUC7Q8TAX7 377 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 ULBP1Q9BZM6 244 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 MRPL16Q9NX20 251 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 VAPAQ9P0L0 249 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 KLF13Q9Y2Y9 288 aaPredicted RBP1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 RHBDD3Q9Y3P4 386 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 NEURL4Q96JN8 1562 aa1.33□□□□□ -2.2
ECHDC1-213ENST00000474240 LOC100653049A0A140TA62 436 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 E7EWF7 191 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 G3V3Q6 166 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 TP53I11O14683 189 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 ZNF73O43830 326 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 KRT34O76011 436 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 GPR75O95800 540 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 SNAI1O95863 264 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 SOD3P08294 240 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 GOLGA7BQ2TAP0 167 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 PYCR3Q53H96 274 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 ACSBG2Q5FVE4 666 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 TMEM215Q68D42 235 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 OR6K2Q8NGY2 324 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 NELFBQ8WX92 580 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 TFGQ92734 400 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 COPS4Q9BT78 406 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 SHCBP1LQ9BZQ2 653 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 PRORYQ9H606 182 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 TDRD3Q9H7E2 651 aaKnown RBP1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 TUBA4BQ9H853 241 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 TMEM106BQ9NUM4 274 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms