RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FMODQ06828 376 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RPL18Q07020 188 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC3A1Q07837 685 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MFGE8Q08431 387 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RAB40BQ12829 278 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SRSF9Q13242 221 aaKnown RBP eCLIP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SRSF6Q13247 344 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 DYNC1I2Q13409 638 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TPBGQ13641 420 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SERTAD2Q14140 314 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF846Q147U1 533 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OXA1LQ15070 435 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CDK5R1Q15078 307 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 QPRTQ15274 297 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ANGPT1Q15389 498 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 P2RY14Q15391 338 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SF3A2Q15428 464 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SPHARQ15513 63 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNHIT3Q15649 155 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NSDHLQ15738 373 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 INAQ16352 499 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MOGQ16653 247 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MEP1BQ16820 701 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 DGUOKQ16854 277 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PLPPR5Q32ZL2 321 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF829Q3KNS6 432 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A35Q3KQZ1 300 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TIMM50Q3ZCQ8 353 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF404Q494X3 552 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GLYR1Q49A26 553 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NKAIN1Q4KMZ8 207 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 KLHL12Q53G59 568 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF684Q5T5D7 378 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ATP1A1-AS1Q5TC04 95 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR5M10Q6IEU7 315 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NIPAL1Q6NVV3 410 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 LEG1Q6P5S2 330 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 FAM199XQ6PEV8 388 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ULK3Q6PHR2 472 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CNIH2Q6PI25 160 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ARL9Q6T311 187 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM205Q6UW68 189 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 DHRS11Q6UWP2 260 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ARSKQ6UWY0 536 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF550Q7Z398 422 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NANOGNBQ7Z5D8 188 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RABEPKQ7Z6M1 372 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 BIVMQ86UB2 503 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OAFQ86UD1 273 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 LHFPL3Q86UP9 236 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CROCCP3Q8IVE0 287 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GID4Q8IVV7 300 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NAXDQ8IW45 347 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC35F2Q8IXU6 374 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TIGD4Q8IY51 512 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR6V1Q8N148 313 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 KDM8Q8N371 416 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PRSS35Q8N3Z0 413 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 LINC00471Q8N535 108 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 FADS6Q8N9I5 356 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZBTB44Q8NCP5 570 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PLPP5Q8NEB5 264 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR2M3Q8NG83 312 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR7G1Q8NGA0 311 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR10H4Q8NGA5 316 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR4D9Q8NGE8 314 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR52L1Q8NGH7 329 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR52E2Q8NGJ4 325 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR51A4Q8NGJ6 313 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR5H6Q8NGV6 325 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR4K13Q8NH42 304 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR52N1Q8NH53 320 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR5W2Q8NH69 310 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MCFD2Q8NI22 146 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NUBPLQ8TB37 319 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 LGALS14Q8TCE9 139 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GPR119Q8TDV5 335 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CT55Q8WUE5 264 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 DNAJA4Q8WW22 397 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TRUB1Q8WWH5 349 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 LIPHQ8WWY8 451 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OSTF1Q92882 214 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 UFD1Q92890 307 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NAT6Q93015 286 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PTP4A1Q93096 173 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MYDGFQ969H8 173 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 BORCS5Q969J3 196 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM203Q969S6 136 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A46Q96AG3 418 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NTNG2Q96CW9 530 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NXPE2Q96DL1 559 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SMIM19Q96E16 107 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZHX1-C8orf76Q96EF9 292 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PELI1Q96FA3 418 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 BSCL2Q96G97 398 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 VMP1Q96GC9 406 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ARL5BQ96KC2 179 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 C4orf36Q96KX1 117 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IMMP1LQ96LU5 166 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms