RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 IFT22Q9H7X7 185 aa10.89□□□□□ -0.67
VPS13D-205ENST00000473099 ZMAT3Q9HA38 289 aaKnown RBP10.89□□□□□ -0.67
VPS13D-205ENST00000473099 IL19Q9UHD0 177 aa10.89□□□□□ -0.67
VPS13D-205ENST00000473099 GLS2Q9UI32 602 aa10.89□□□□□ -0.67
VPS13D-205ENST00000473099 FBXO9Q9UK97 447 aaPredicted RBP10.89□□□□□ -0.67
VPS13D-205ENST00000473099 WIPF3A6NGB9 483 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 A6NLC8 198 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 ZG16O60844 167 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 OR7C1O76099 320 aaPredicted RBP10.88□□□□□ -0.67
VPS13D-205ENST00000473099 OR4A8P0C604 315 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 NAT1P18440 290 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 DTYMKP23919 212 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 APOBEC3AP31941 199 aaPredicted RBP10.88□□□□□ -0.67
VPS13D-205ENST00000473099 CFHR2P36980 270 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 GATA4P43694 442 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 MAB21L1Q13394 359 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 MEF2DQ14814 521 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 ADIPOQQ15848 244 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 PIGYQ3MUY2 71 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 NRIP2Q9BQI9 281 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 FN3KRPQ9HA64 309 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 HRASLSQ9HDD0 168 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 FAIMQ9NVQ4 179 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 RASL12Q9NYN1 266 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 RCC2Q9P258 522 aaKnown RBP10.88□□□□□ -0.67
VPS13D-205ENST00000473099 ANAPC10Q9UM13 185 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 EDARQ9UNE0 448 aa10.88□□□□□ -0.67
VPS13D-205ENST00000473099 DSCAMO60469 2012 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 ABCA4P78363 2273 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 PKDREJQ9NTG1 2253 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 ZSCAN5BA6NJL1 495 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 POM121CA8CG34 1229 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 ZNF736B4DX44 427 aaPredicted RBP10.87□□□□□ -0.67
VPS13D-205ENST00000473099 M0R233 179 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 CDIPTO14735 213 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 RHBDL1O75783 438 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 NXPH2O95156 264 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 CD74P04233 296 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 CD55P08174 381 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
VPS13D-205ENST00000473099 SERPINF1P36955 418 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 KIR2DL3P43628 341 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 RBM39Q14498 530 aaKnown RBP10.87□□□□□ -0.67
VPS13D-205ENST00000473099 ZMYND11Q15326 602 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 CDSNQ15517 529 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 EFNB3Q15768 340 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 SMIM21Q3B7S5 101 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 FAM209AQ5JX71 171 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 NKAPLQ5M9Q1 402 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 SIGIRRQ6IA17 410 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 STEAP1BQ6NZ63 245 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 WDR82Q6UXN9 313 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 C6orf201Q7Z4U5 140 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 FAM90A1Q86YD7 464 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 NUDCD2Q8WVJ2 157 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 GTF3AQ92664 365 aaKnown RBP10.87□□□□□ -0.67
VPS13D-205ENST00000473099 CREB3L1Q96BA8 519 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 MEGF10Q96KG7 1140 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 CACNG6Q9BXT2 260 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 HES4Q9HCC6 221 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 DSCAML1Q8TD84 2053 aa10.87□□□□□ -0.67
VPS13D-205ENST00000473099 B9A039 149 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 MCRIP1C9JLW8 97 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 SSX5O60225 188 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 GOSR1O95249 250 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 RAB3DO95716 219 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 TNFRSF1AP19438 455 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 RAG2P55895 527 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 TAS2R46P59540 309 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 TNFAIP6P98066 277 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-205ENST00000473099 IKZF1Q13422 519 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 ZNF146Q15072 292 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 TESK1Q15569 626 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 PLA1AQ53H76 456 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 C11orf53Q8IXP5 236 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 DMRTC2Q8IXT2 367 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-205ENST00000473099 FAM222BQ8WU58 562 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 OR2V2Q96R30 315 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 DHRS9Q9BPW9 319 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 CMSS1Q9BQ75 279 aaKnown RBP10.86□□□□□ -0.67
VPS13D-205ENST00000473099 MARVELD1Q9BSK0 173 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 TMEM204Q9BSN7 226 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 EGLN1Q9GZT9 426 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 MS4A5Q9H3V2 200 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 RIMS4Q9H426 269 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-205ENST00000473099 SEBOXQ9HB31 216 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-205ENST00000473099 NLKQ9UBE8 527 aa10.86□□□□□ -0.67
VPS13D-205ENST00000473099 RAI1Q7Z5J4 1906 aaPredicted RBP10.86□□□□□ -0.67
VPS13D-205ENST00000473099 KIAA2026Q5HYC2 2103 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 FLNCQ14315 2725 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 A0A1B0GVG6 124 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 hCG_1807616A0A1W2PRN6 198 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 MEIS3P1A6NDR6 274 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 C17orf100A8MU93 164 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 SRRM5B3KS81 715 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 DISC1C4P0D8 188 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 E7EQL1 145 aa10.85□□□□□ -0.67
VPS13D-205ENST00000473099 F8VVB4 439 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms