RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 FOXRED1Q96CU9 486 aaPredicted RBP5.41□□□□□ -1.54
HDAC1-205ENST00000472928 C10orf35Q96D05 121 aa5.41□□□□□ -1.54
HDAC1-205ENST00000472928 SORCS2Q96PQ0 1159 aa5.41□□□□□ -1.54
HDAC1-205ENST00000472928 SPACA5Q96QH8 159 aa5.41□□□□□ -1.54
HDAC1-205ENST00000472928 METTL17Q9H7H0 456 aaPredicted RBP5.41□□□□□ -1.54
HDAC1-205ENST00000472928 TMEM138Q9NPI0 162 aa5.41□□□□□ -1.54
HDAC1-205ENST00000472928 CISD1Q9NZ45 108 aaKnown RBP5.41□□□□□ -1.54
HDAC1-205ENST00000472928 ABRACLQ9P1F3 81 aa5.41□□□□□ -1.54
HDAC1-205ENST00000472928 KMT2CQ8NEZ4 4911 aaKnown RBP5.41□□□□□ -1.54
HDAC1-205ENST00000472928 IGHV4-61A0A0C4DH41 118 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 IGKV1-9A0A0C4DH69 117 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 NUDT19A8MXV4 375 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 E7EQL1 145 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 ATP6V1G2-DDX39BF2Z307 99 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 LY6HO94772 140 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 VENTXO95231 258 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 NRASP01111 189 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 CALCBP10092 127 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 ELK1P19419 428 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 HNF1AP20823 631 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 HTR2CP28335 458 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 TNFSF8P32971 234 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 MPV17P39210 176 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 ETV6P41212 452 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR3A4PP47883 348 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 POU3F4P49335 361 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 NAAAQ02083 359 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 PRDX4Q13162 271 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 SNTB2Q13425 540 aaKnown RBP5.4□□□□□ -1.54
HDAC1-205ENST00000472928 ODF1Q14990 250 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 UBE2V2Q15819 145 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 CR1LQ2VPA4 569 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 DMRTC1Q5HYR2 192 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 AWAT2Q6E213 333 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR2T2Q6IF00 324 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 FAM131AQ6UXB0 335 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 UNQ6126/PRO20091Q6UXV3 157 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 FBXW12Q6X9E4 464 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 CCDC190Q86UF4 302 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 LRRC28Q86X40 367 aaPredicted RBP5.4□□□□□ -1.54
HDAC1-205ENST00000472928 LYSMD2Q8IV50 215 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 ZDHHC23Q8IYP9 409 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 FTMTQ8N4E7 242 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 PNLDC1Q8NA58 520 aaKnown RBP5.4□□□□□ -1.54
HDAC1-205ENST00000472928 CSNK2A3Q8NEV1 391 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR4D6Q8NGJ1 314 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR5D18Q8NGL1 313 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR1J1Q8NGS3 322 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR6F1Q8NGZ6 308 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 SLC25A40Q8TBP6 338 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 DVL3Q92997 716 aaPredicted RBP5.4□□□□□ -1.54
HDAC1-205ENST00000472928 SPSB1Q96BD6 273 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 FAM3DQ96BQ1 224 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 SLC25A38Q96DW6 304 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 DIRAS2Q96HU8 199 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 GPER1Q99527 375 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 TMEM246Q9BRR3 403 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 UQCC2Q9BRT2 126 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR2J1Q9GZK6 312 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 EXTL2Q9UBQ6 330 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 OR5V1Q9UGF6 321 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 SPATA2Q9UM82 520 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 MRPS28Q9Y2Q9 187 aaKnown RBP5.4□□□□□ -1.54
HDAC1-205ENST00000472928 RHBDD3Q9Y3P4 386 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 ETV7Q9Y603 341 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 V9GYH0 126 aa5.4□□□□□ -1.54
HDAC1-205ENST00000472928 WNK2Q9Y3S1 2297 aa5.4□□□□□ -1.55
HDAC1-205ENST00000472928 TMEM272A0A1B0GTI8 110 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 FAM230AA0A1W2PPH8 454 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 HMX3A6NHT5 357 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ANKRD30BLA7E2S9 258 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 CD300LBA8K4G0 201 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ZNF850A8MQ14 1090 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 H7C417 338 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 TRIM77I1YAP6 450 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ABCD4O14678 606 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 TIMM8AO60220 97 aaPredicted RBP5.39□□□□□ -1.55
HDAC1-205ENST00000472928 GMDSO60547 372 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 TMEM127O75204 238 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 PLATP00750 562 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 CRYAAP02489 173 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 APOA1P02647 267 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 CSF3P09919 207 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ZNF35P13682 527 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ZNF93P35789 620 aaPredicted RBP5.39□□□□□ -1.55
HDAC1-205ENST00000472928 TALDO1P37837 337 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 NKX2-5P52952 324 aaPredicted RBP5.39□□□□□ -1.55
HDAC1-205ENST00000472928 UCP2P55851 309 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 DEFA1P59665 94 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 DEFA3P59666 94 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 RPS23P62266 143 aaKnown RBP5.39□□□□□ -1.55
HDAC1-205ENST00000472928 MRPS15P82914 257 aaKnown RBP5.39□□□□□ -1.55
HDAC1-205ENST00000472928 DEFA6Q01524 100 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ZNF45Q02386 682 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 PLA2G7Q13093 441 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 IL18Q14116 193 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ZFP69Q49AA0 526 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 ESCO2Q56NI9 601 aa5.39□□□□□ -1.55
HDAC1-205ENST00000472928 PRR31Q5SQ13 230 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms