RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 CCDC54Q8NEL0 328 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 MRPL24Q96A35 216 aaKnown RBP12.93□□□□□ -0.34
UBXN11-213ENST00000472155 RAB18Q9NP72 206 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 PARD6AQ9NPB6 346 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 CYTL1Q9NRR1 136 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 IGHV3-64DA0A0J9YX35 117 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 A8MXK9 166 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 RBMXP38159 391 aaKnown RBP12.92□□□□□ -0.34
UBXN11-213ENST00000472155 PXT1Q8NFP0 134 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 RGCCQ9H4X1 137 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 LDAHQ9H6V9 325 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 HSF4Q9ULV5 492 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 CEP250Q9BV73 2442 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 RPL36A-HNRNPH2H7BZ11 118 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 SYNGR1O43759 233 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 FGF2P09038 288 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 IL15RAQ13261 267 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 SLC10A1Q14973 349 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 CLEC9AQ6UXN8 241 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 BVESQ8NE79 360 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 DEFB124Q8NES8 71 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 POM121L2Q96KW2 1035 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 PARPBPQ9NWS1 579 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 MTCH1Q9NZJ7 389 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
UBXN11-213ENST00000472155 TEX13DA0A0J9YY54 714 aaPredicted RBP12.92□□□□□ -0.34
UBXN11-213ENST00000472155 PQLC2LA1A4F0 135 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 LINC01387J3KSC0 135 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 CA11O75493 328 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 FCGR2CP31995 323 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 PIGPP57054 158 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 OR2A2Q6IF42 318 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 GLRX5Q86SX6 157 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 GCNT2Q8N0V5 402 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 ZFP62Q8NB50 900 aaPredicted RBP12.92□□□□□ -0.34
UBXN11-213ENST00000472155 PIK3IP1Q96FE7 263 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF442Q9H7R0 627 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 PFDN2Q9UHV9 154 aa12.92□□□□□ -0.34
UBXN11-213ENST00000472155 BSNQ9UPA5 3926 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF318Q5VUA4 2279 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 TRBV6-7A0A0A0MS04 114 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 RRP8O43159 456 aaKnown RBP12.91□□□□□ -0.34
UBXN11-213ENST00000472155 PDCD6O75340 191 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 IFNA2P01563 188 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 CELA3BP08861 270 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 ARG2P78540 354 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 MRPS24Q96EL2 167 aaKnown RBP12.91□□□□□ -0.34
UBXN11-213ENST00000472155 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF732B4DXR9 585 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 AKR1C2P52895 323 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 AKR1C1Q04828 323 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 TSC22D1Q15714 1073 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF766Q5HY98 468 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 NSUN5P2Q63ZY6 315 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 MRPL21Q7Z2W9 205 aaKnown RBP12.91□□□□□ -0.34
UBXN11-213ENST00000472155 C17orf78Q8N4C9 275 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
UBXN11-213ENST00000472155 KLF13Q9Y2Y9 288 aaPredicted RBP12.91□□□□□ -0.34
UBXN11-213ENST00000472155 LOC105371267A0A1B0GV96 52 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 CRYM-AS1A6NIL9 109 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 SNAPC5O75971 98 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 OR5AC1P0C628 307 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 IL32P24001 234 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 NUP62P37198 522 aaPredicted RBP12.9□□□□□ -0.34
UBXN11-213ENST00000472155 SNTB1Q13884 538 aaKnown RBP12.9□□□□□ -0.34
UBXN11-213ENST00000472155 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
UBXN11-213ENST00000472155 ATRAIDQ6UW56 229 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 MCEMP1Q8IX19 187 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 TMED6Q8WW62 240 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 FER1L6-AS2Q96M78 137 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 SCGB3A2Q96PL1 93 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 OR2S2Q9NQN1 319 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 NECAP2Q9NVZ3 263 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF391Q9UJN7 358 aa12.9□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF724A8MTY0 619 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 KLRC4-KLRK1H3BQV0 150 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 CTSDP07339 412 aaPredicted RBP12.9□□□□□ -0.35
UBXN11-213ENST00000472155 ZP3P21754 424 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 CCL11P51671 97 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 HOXA4Q00056 320 aaPredicted RBP12.9□□□□□ -0.35
UBXN11-213ENST00000472155 KIAA2026Q5HYC2 2103 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 DHRS11Q6UWP2 260 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 OR1S2Q8NGQ3 325 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 MED9Q9NWA0 146 aa12.9□□□□□ -0.35
UBXN11-213ENST00000472155 RCC1P18754 421 aaPredicted RBP12.89□□□□□ -0.35
UBXN11-213ENST00000472155 MALLQ13021 153 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 PPA1Q15181 289 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 NRN1LQ496H8 165 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 GGNBP1Q5YKI7 109 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 PRSS54Q6PEW0 395 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 LYZL2Q7Z4W2 148 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 DHRS9Q9BPW9 319 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 FAM117AQ9C073 453 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 SLC25A32Q9H2D1 315 aa12.89□□□□□ -0.35
UBXN11-213ENST00000472155 DECR2Q9NUI1 292 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms