RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CITED2Q99967 270 aaPredicted RBP6.49□□□□□ -1.37
USP48-207ENST00000471752 ZNF649Q9BS31 505 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 GABARAPL3Q9BY60 117 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 PKIBQ9C010 78 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 ISG20L2Q9H9L3 353 aaKnown RBP6.49□□□□□ -1.37
USP48-207ENST00000471752 AMBNQ9NP70 447 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 USE1Q9NZ43 259 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 WARS2Q9UGM6 360 aaKnown RBP6.49□□□□□ -1.37
USP48-207ENST00000471752 MYRFQ9Y2G1 1151 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 CAB39Q9Y376 341 aaPredicted RBP6.49□□□□□ -1.37
USP48-207ENST00000471752 KIAA2026Q5HYC2 2103 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 TRAV39A0A0B4J263 110 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 BTBD17A6NE02 478 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 VGLL3A8MV65 326 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 HAND1O96004 215 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 IGHV3-7P01780 117 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 OR2T7P0C7T2 308 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 GABRB1P18505 474 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 ATF1P18846 271 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 GABRR1P24046 479 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 POU3F4P49335 361 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 FUT6P51993 359 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 ACTA2P62736 377 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 ACTG2P63267 376 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 ACTC1P68032 377 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 ACTA1P68133 377 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 ZNF91Q05481 1191 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 DYNC1I2Q13409 638 aaKnown RBP6.48□□□□□ -1.37
USP48-207ENST00000471752 SAMD5Q5TGI4 173 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 C1orf146Q5VVC0 180 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 ZNF626Q68DY1 528 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 Q6P435 159 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 Q6ZPA2 131 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 LHFPL3Q86UP9 236 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 GID4Q8IVV7 300 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 FAM58AQ8N1B3 248 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 OR11H6Q8NGC7 330 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 DNAJC9Q8WXX5 260 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 EMG1Q92979 244 aaKnown RBP6.48□□□□□ -1.37
USP48-207ENST00000471752 ORAI1Q96D31 301 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 LGALS12Q96DT0 336 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 RNFT2Q96EX2 444 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 CENPNQ96H22 339 aaPredicted RBP6.48□□□□□ -1.37
USP48-207ENST00000471752 OCSTAMPQ9BR26 566 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 TEX12Q9BXU0 123 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 CHST5Q9GZS9 411 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 TCF19Q9Y242 345 aa6.48□□□□□ -1.37
USP48-207ENST00000471752 IGHV2-26A0A0B4J1V2 119 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 A0A1W2PRX2 142 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 OR4C45A6NMZ5 311 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 FAM90A22PA8MWA6 464 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 J3QLW9 94 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 EI24O14681 340 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 SULT1C4O75897 302 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 OR2H2O95918 312 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 AMY1AP04745 511 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 AMY2AP04746 511 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 ALPLP05186 524 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 CHRM2P08172 466 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 ZNF19P17023 458 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 PRKACAP17612 351 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 AZGP1P25311 298 aaKnown RBP6.47□□□□□ -1.37
USP48-207ENST00000471752 GTF2A1P52655 376 aaPredicted RBP6.47□□□□□ -1.37
USP48-207ENST00000471752 MTCP1P56278 107 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 LGALS4P56470 323 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 SLC34A1Q06495 639 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 SCN1BQ07699 218 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 AESQ08117 197 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 PDZK1IP1Q13113 114 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 DIAPH2-AS1Q14236 149 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 KPNB1Q14974 876 aaKnown RBP6.47□□□□□ -1.37
USP48-207ENST00000471752 GRK1Q15835 563 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 Q6ZTK2 550 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 GDPD3Q7L5L3 318 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 C5orf24Q7Z6I8 188 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 OR8H2Q8N162 312 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 Q8N2B8 174 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 OR4P4Q8NGL7 312 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 OR4C13Q8NGP0 309 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 OR8J1Q8NGP2 316 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 OR13C9Q8NGT0 318 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 RGP1Q92546 391 aaPredicted RBP6.47□□□□□ -1.37
USP48-207ENST00000471752 LEAP2Q969E1 77 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 PELI1Q96FA3 418 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 BORCS8Q96FH0 119 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 COQ2Q96H96 371 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 SNX22Q96L94 193 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 WNT10AQ9GZT5 417 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 FAM234AQ9H0X4 552 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 PPIL3Q9H2H8 161 aaKnown RBP6.47□□□□□ -1.37
USP48-207ENST00000471752 MOB1AQ9H8S9 216 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 ZNF286AQ9HBT8 521 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 HMG20AQ9NP66 347 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 SLC7A11Q9UPY5 501 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 GSTK1Q9Y2Q3 226 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 POLDIP2Q9Y2S7 368 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 SIRT4Q9Y6E7 314 aaPredicted RBP6.47□□□□□ -1.37
USP48-207ENST00000471752 PLXNB1O43157 2135 aa6.47□□□□□ -1.37
USP48-207ENST00000471752 HUWE1Q7Z6Z7 4374 aaKnown RBP6.46□□□□□ -1.38
USP48-207ENST00000471752 A0A0G2JK05 382 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms