RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 IL36GQ9NZH8 169 aa12.54□□□□□ -0.4
SNX13-205ENST00000471744 SF3B6Q9Y3B4 125 aaKnown RBP12.54□□□□□ -0.4
SNX13-205ENST00000471744 MAB21L2Q9Y586 359 aa12.54□□□□□ -0.4
SNX13-205ENST00000471744 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 C22orf46C9J442 243 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 F8VVB4 439 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 F8VWA3 439 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 CCRL2O00421 344 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
SNX13-205ENST00000471744 IGKV1D-12P01611 117 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 MAS1P04201 325 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 SRMP19623 302 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 GALP22466 123 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 PSMB9P28065 219 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 RANBP1P43487 201 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 CAPZA1P52907 286 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 RIPPLY3P57055 190 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 FGF12P61328 243 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 RPS25P62851 125 aaKnown RBP12.53□□□□□ -0.4
SNX13-205ENST00000471744 PAX8Q06710 450 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 GPR176Q14439 515 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 RSU1Q15404 277 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 DGUOKQ16854 277 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 BTN2A1Q7KYR7 527 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 JAGN1Q8N5M9 183 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 ZNRF1Q8ND25 227 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 OR5D13Q8NGL4 314 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 METTL9Q9H1A3 318 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 ELL3Q9HB65 397 aaPredicted RBP12.53□□□□□ -0.4
SNX13-205ENST00000471744 RPUSD1Q9UJJ7 312 aaKnown RBP12.53□□□□□ -0.4
SNX13-205ENST00000471744 AUP1Q9Y679 476 aa12.53□□□□□ -0.4
SNX13-205ENST00000471744 A0A087WXM4 84 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 TRBV23-1A0A0A0MS06 115 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 A0A1B0GW55 424 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 SH2D1BO14796 132 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 HAND1O96004 215 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
SNX13-205ENST00000471744 SFTPBP07988 381 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4L2P0CJ85 424 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4L3P0CJ86 424 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4L4P0CJ87 422 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4L5P0CJ88 424 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4L6P0CJ89 424 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4L7P0CJ90 424 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 NDUFB7P17568 137 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 SRD5A1P18405 259 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 SRP14P37108 136 aaKnown RBP12.52□□□□□ -0.41
SNX13-205ENST00000471744 OR3A4PP47883 348 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 INSL4Q14641 139 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 SSX1Q16384 188 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4L9Q6RFH8 374 aaPredicted RBP12.52□□□□□ -0.41
SNX13-205ENST00000471744 TMEM91Q6ZNR0 172 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 RNF144BQ7Z419 303 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 Q8NFD4 153 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 C8orf46Q8TAG6 207 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 TBC1D15Q8TC07 691 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 ZDHHC16Q969W1 377 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 SNX22Q96L94 193 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DCTN5Q9BTE1 182 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 ZNF696Q9H7X3 374 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 DUX4Q9UBX2 424 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 JMJD1CQ15652 2540 aa12.52□□□□□ -0.41
SNX13-205ENST00000471744 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 K7N7A8 449 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 FCN3O75636 299 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 FAM157CP0CG43 387 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 SELLP14151 372 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 FABP5Q01469 135 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 COL10A1Q03692 680 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 FAM27D1Q5T7N8 215 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 SYT6Q5T7P8 510 aaPredicted RBP12.51□□□□□ -0.41
SNX13-205ENST00000471744 CD200R1LQ6Q8B3 271 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 ASCC1Q8N9N2 400 aaKnown RBP12.51□□□□□ -0.41
SNX13-205ENST00000471744 CHST4Q8NCG5 386 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 TSPAN14Q8NG11 270 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 OR51T1Q8NGJ9 327 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 NANPQ8TBE9 248 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 H1FXQ92522 213 aaKnown RBP12.51□□□□□ -0.41
SNX13-205ENST00000471744 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
SNX13-205ENST00000471744 GHRLQ9UBU3 117 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 ING4Q9UNL4 249 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 GSTK1Q9Y2Q3 226 aa12.51□□□□□ -0.41
SNX13-205ENST00000471744 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
SNX13-205ENST00000471744 ZFHX3Q15911 3703 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 TRDV1A0A1B0GX56 115 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 A0A1W2PPH5 198 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 ZNF737O75373 536 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 TFF1P04155 84 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 TK1P04183 234 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 CEBPDP49716 269 aaPredicted RBP12.5□□□□□ -0.41
SNX13-205ENST00000471744 PSMD7P51665 324 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 GP2P55259 537 aaKnown RBP12.5□□□□□ -0.41
SNX13-205ENST00000471744 NHLRC3Q5JS37 347 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms