RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 M0QYG6 137 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 CDIPTO14735 213 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 ATXN7O15265 892 aaPredicted RBP7.96□□□□□ -1.14
VPS52-216ENST00000471309 PEX14O75381 377 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 AMY2AP04746 511 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 FCER2P06734 321 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 H2AFB2P0C5Z0 115 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 ZNF735P0CB33 412 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 SELENOVP59797 346 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 MRPS15P82914 257 aaKnown RBP7.96□□□□□ -1.14
VPS52-216ENST00000471309 MAB21L1Q13394 359 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 IKZF1Q13422 519 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 IGFBP7Q16270 282 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 C4orf17Q53FE4 359 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 SPIN3Q5JUX0 258 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 VAX1Q5SQQ9 334 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 NCMAPQ5T1S8 102 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 OR52W1Q6IF63 320 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 VHLLQ6RSH7 139 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 SLC22A25Q6T423 547 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 LRP11Q86VZ4 500 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 BATF2Q8N1L9 274 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 BEST4Q8NFU0 473 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 OR4S1Q8NGB4 309 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 OR51S1Q8NGJ8 323 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 OR4K15Q8NH41 348 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 CA5BP1Q8WTZ4 195 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 CYYR1Q96J86 154 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 ZNF488Q96MN9 340 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 HS3ST6Q96QI5 342 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 PRRT1Q99946 306 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 SYT3Q9BQG1 590 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 NEURL2Q9BR09 285 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 FAAP24Q9BTP7 215 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 MRPL37Q9BZE1 423 aaKnown RBP7.96□□□□□ -1.14
VPS52-216ENST00000471309 TINAGL1Q9GZM7 467 aaPredicted RBP7.96□□□□□ -1.14
VPS52-216ENST00000471309 HES4Q9HCC6 221 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 C12orf4Q9NQ89 552 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 IL36RNQ9UBH0 155 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 NDRG3Q9UGV2 375 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 EDARQ9UNE0 448 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 ALG5Q9Y673 324 aa7.96□□□□□ -1.14
VPS52-216ENST00000471309 PRAF2O60831 178 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 GLAP06280 429 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 GRPP07492 148 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 FCGR3AP08637 254 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 AMY2BP19961 511 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 HRH1P35367 487 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 SNU13P55769 128 aaKnown RBP7.95□□□□□ -1.14
VPS52-216ENST00000471309 TAS2R46P59540 309 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 ZNF146Q15072 292 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 MICBQ29980 383 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 ATAD3CQ5T2N8 411 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 PRAMEF6Q5VXH4 476 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 FIP1L1Q6UN15 594 aaKnown RBP7.95□□□□□ -1.14
VPS52-216ENST00000471309 WDR82Q6UXN9 313 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 IDO2Q6ZQW0 420 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 ZNF554Q86TJ5 538 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 AKAP14Q86UN6 197 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 C11orf53Q8IXP5 236 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 BPIFB2Q8N4F0 458 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 ARRDC1Q8N5I2 433 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 OR2Z1Q8NG97 314 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 GTF3AQ92664 365 aaKnown RBP7.95□□□□□ -1.14
VPS52-216ENST00000471309 ELMOD3Q96FG2 381 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 CMSS1Q9BQ75 279 aaKnown RBP7.95□□□□□ -1.14
VPS52-216ENST00000471309 SLC25A21Q9BQT8 299 aaPredicted RBP7.95□□□□□ -1.14
VPS52-216ENST00000471309 GINS4Q9BRT9 223 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 KCNJ16Q9NPI9 418 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 ZNF701Q9NV72 531 aaPredicted RBP7.95□□□□□ -1.14
VPS52-216ENST00000471309 TAAR3PQ9P1P4 343 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 SCP2D1Q9UJQ7 156 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 POU2F3Q9UKI9 436 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 PIEZO2Q9H5I5 2752 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 ATMQ13315 3056 aa7.95□□□□□ -1.14
VPS52-216ENST00000471309 DSPP15924 2871 aaKnown RBP7.95□□□□□ -1.14
VPS52-216ENST00000471309 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.94□□□□□ -1.14
VPS52-216ENST00000471309 HMX3A6NHT5 357 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 A6NLC8 198 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 SHISA9B4DS77 424 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 ARPC1BO15143 372 aaKnown RBP7.94□□□□□ -1.14
VPS52-216ENST00000471309 NXPH2O95156 264 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 NAPSAO96009 420 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 ADH4P08319 380 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 OR4A8P0C604 315 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 AGAP20933 346 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 GATA4P43694 442 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 ZNF81P51508 661 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 RAB25P57735 213 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 TFF3Q07654 80 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 RBM39Q14498 530 aaKnown RBP7.94□□□□□ -1.14
VPS52-216ENST00000471309 CDSNQ15517 529 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 ADIPOQQ15848 244 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 SRSF7Q16629 238 aaKnown RBP eCLIP7.94□□□□□ -1.14
VPS52-216ENST00000471309 NKPD1Q17RQ9 610 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 SHEQ5VZ18 495 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 ADAM5Q6NVV9 412 aa7.94□□□□□ -1.14
VPS52-216ENST00000471309 DMRTC2Q8IXT2 367 aaPredicted RBP7.94□□□□□ -1.14
VPS52-216ENST00000471309 ZNF808Q8N4W9 903 aaPredicted RBP7.94□□□□□ -1.14
VPS52-216ENST00000471309 SUMF2Q8NBJ7 301 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms