RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ADAP1O75689 374 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 JTBO76095 146 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 APOC3P02656 99 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 RFPL3SP0C7P2 107 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 PI3P19957 117 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 ACKR3P25106 362 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 KIR2DS4P43632 304 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 UCP3P55916 312 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 PIGPP57054 158 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 FAM3AP98173 230 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 DEFA5Q01523 94 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 ZNF92Q03936 586 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SRYQ05066 204 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 PDZK1IP1Q13113 114 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 RAB32Q13637 225 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 KIR2DS1Q14954 304 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 OR1C1Q15619 314 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 RSPO1Q2MKA7 263 aaPredicted RBP6.92□□□□□ -1.3
SMC4-212ENST00000470240 ANKRD55Q3KP44 614 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 AADACL3Q5VUY0 350 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SLC22A25Q6T423 547 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 DBX2Q6ZNG2 339 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 LINC00596Q86U02 117 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SKA3Q8IX90 412 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 ZDHHC23Q8IYP9 409 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SPAG16Q8N0X2 631 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 FBXL14Q8N1E6 418 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SVBPQ8N300 66 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 ZNF565Q8N9K5 539 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 OR51F2Q8NH61 342 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 ABHD3Q8WU67 409 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 MAFIPQ8WZ33 124 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 TOMM40LQ969M1 308 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SPSB4Q96A44 273 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SAT2Q96F10 170 aaPredicted RBP6.92□□□□□ -1.3
SMC4-212ENST00000470240 ZNF75AQ96N20 296 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SPIN2AQ99865 258 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 SPIN2BQ9BPZ2 258 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 FAAP24Q9BTP7 215 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 C1QTNF5Q9BXJ0 243 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 WNT10AQ9GZT5 417 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 ARRDC1-AS1Q9H2J1 176 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 RIMS4Q9H426 269 aaPredicted RBP6.92□□□□□ -1.3
SMC4-212ENST00000470240 PLK3Q9H4B4 646 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 MMP26Q9NRE1 261 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 STARD10Q9Y365 291 aa6.92□□□□□ -1.3
SMC4-212ENST00000470240 C5orf63A6NC05 138 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 ANKRD30BLA7E2S9 258 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 ZNF705EA8MWA4 302 aaPredicted RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 E5RGE8 158 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 TRAPPC2LH3BP13 241 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 SCO1O75880 301 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 OR7C1O76099 320 aaPredicted RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 ACTL6AO96019 429 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 MT-CO3P00414 261 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 CST4P01036 141 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 TK1P04183 234 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 GAPDHP04406 335 aaKnown RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 HOXD4P09016 255 aaPredicted RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 CTXN2P0C2S0 81 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 CD79AP11912 226 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 PVALBP20472 110 aaPredicted RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 CCNOP22674 350 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 PTGER4P35408 488 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 APLNRP35414 380 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 RRADP55042 308 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 FXYD4P59646 89 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 SUPT4H1P63272 117 aaKnown RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 ARF1P84077 181 aaKnown RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 MRPL49Q13405 166 aaKnown RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 BTN1A1Q13410 526 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 RBM39Q14498 530 aaKnown RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 GNMTQ14749 295 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 SRSF7Q16629 238 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMC4-212ENST00000470240 MPV17LQ2QL34 196 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 TSPO2Q5TGU0 170 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 SPINK14Q6IE38 97 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 DHRS11Q6UWP2 260 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 SLC25A26Q70HW3 274 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 TIPARPQ7Z3E1 657 aaKnown RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 RNF144BQ7Z419 303 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 ZNF611Q8N823 705 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 OR5T2Q8NGG2 359 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 RTN4IP1Q8WWV3 396 aaPredicted RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 GALNT14Q96FL9 552 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 TSNAXQ99598 290 aaKnown RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 LDAHQ9H6V9 325 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 CALHM2Q9HA72 323 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 TAF9BQ9HBM6 251 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 ACKR4Q9NPB9 350 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 DEPPQ9NTK1 212 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 DECR2Q9NUI1 292 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 GPR160Q9UJ42 338 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 PCDHB10Q9UN67 800 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 NSG2Q9Y328 171 aa6.91□□□□□ -1.3
SMC4-212ENST00000470240 NCOA6Q14686 2063 aaPredicted RBP6.91□□□□□ -1.3
SMC4-212ENST00000470240 OR5B21A6NL26 309 aa6.9□□□□□ -1.3
SMC4-212ENST00000470240 FAM166BA8MTA8 275 aa6.9□□□□□ -1.3
SMC4-212ENST00000470240 M0R296 226 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms