RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 OR8G5Q8NG78 346 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 OR11H7Q8NGC8 314 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 OR13C8Q8NGS7 320 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 ZNF431Q8TF32 576 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-205ENST00000469129 SNRNP40Q96DI7 357 aaKnown RBP7.99□□□□□ -1.13
SMC1A-205ENST00000469129 HYLS1Q96M11 299 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 DMRTB1Q96MA1 342 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 FYTTD1Q96QD9 318 aaKnown RBP7.99□□□□□ -1.13
SMC1A-205ENST00000469129 SEC22CQ9BRL7 303 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 FGF23Q9GZV9 251 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-205ENST00000469129 OR51I2Q9H344 312 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 RANBP3Q9H6Z4 567 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-205ENST00000469129 TMEM100Q9NV29 134 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 EHFQ9NZC4 300 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 CRIM1Q9NZV1 1036 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 RCC2Q9P258 522 aaKnown RBP7.99□□□□□ -1.13
SMC1A-205ENST00000469129 MGAT4CQ9UBM8 478 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 AK3Q9UIJ7 227 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 PURGQ9UJV8 347 aaKnown RBP7.99□□□□□ -1.13
SMC1A-205ENST00000469129 NPTNQ9Y639 398 aa7.99□□□□□ -1.13
SMC1A-205ENST00000469129 NBEAQ8NFP9 2946 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 A0A0G2JNJ9 132 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 POM121CA8CG34 1229 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 CEACAM18A8MTB9 384 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 A8MXE2 369 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 M0R1B8 84 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 SNAPC5O75971 98 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 HPXP02790 462 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 GIPP09681 153 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 OR4E1P0C645 316 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 VSIG10L2P0DP72 767 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 SFTPCP11686 197 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 BMP5P22003 454 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 MDH2P40926 338 aaKnown RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 GLP1RP43220 463 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ZNF83P51522 516 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ERVS71-1P61550 626 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 PSG7Q13046 419 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 IKZF1Q13422 519 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 RBM39Q14498 530 aaKnown RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 SRSF7Q16629 238 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 LPCAT3Q6P1A2 487 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 C11orf88Q6PI97 169 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 TMED4Q7Z7H5 227 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 RTN4RL2Q86UN3 420 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 FAM58AQ8N1B3 248 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ZBTB8BQ8NAP8 495 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 TERB2Q8NHR7 220 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 GTF3AQ92664 365 aaKnown RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ZNF486Q96H40 463 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 VKORC1Q9BQB6 163 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 SULT4A1Q9BR01 284 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ST6GALNAC5Q9BVH7 336 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 C1QTNF6Q9BXI9 259 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ZNF436Q9C0F3 470 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 CXXC4Q9H2H0 198 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 RIMS4Q9H426 269 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 CHMP1AQ9HD42 196 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ASF1BQ9NVP2 202 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 NECAP2Q9NVZ3 263 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 MTCH1Q9NZJ7 389 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 Q9UFV3 132 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 ANXA10Q9UJ72 324 aa7.98□□□□□ -1.13
SMC1A-205ENST00000469129 MCRIP1C9JLW8 97 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 H7C1Q1 480 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 SYNGR1O43759 233 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 LILRA1O75019 489 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 HLA-AP01891 365 aaKnown RBP7.97□□□□□ -1.13
SMC1A-205ENST00000469129 ACAA1P09110 424 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-205ENST00000469129 PPP3CBP16298 524 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 CALCRP30988 508 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 MPV17P39210 176 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 NPBWR2P48146 333 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 GZMKP49863 264 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 RAP2BP61225 183 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 MPPED2Q15777 294 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 FAM76BQ5HYJ3 339 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 SPIN3Q5JUX0 258 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 SEZ6L2Q6UXD5 910 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 Q6ZS49 121 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 MOB1BQ7L9L4 216 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 LYG2Q86SG7 212 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 SLC25A42Q86VD7 318 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 LHFPL1Q86WI0 220 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 C12orf45Q8N5I9 185 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-205ENST00000469129 SCCPDHQ8NBX0 429 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 OR2AK2Q8NG84 335 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 OR13G1Q8NGZ3 307 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 NEK7Q8TDX7 302 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 RND1Q92730 232 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 BBC3Q96PG8 261 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-205ENST00000469129 DHRS9Q9BPW9 319 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 FAAP24Q9BTP7 215 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 IFT22Q9H7X7 185 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 TINAGQ9UJW2 476 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 C14orf166Q9Y224 244 aaKnown RBP7.97□□□□□ -1.13
SMC1A-205ENST00000469129 VSIG4Q9Y279 399 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 MGAQ8IWI9 3026 aa7.97□□□□□ -1.13
SMC1A-205ENST00000469129 KIR2DS1A0A191URI9 304 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms