RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TMEM238C9JI98 176 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 HCKP08631 526 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 S100PP25815 95 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 PPP1CBP62140 327 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 ADORA2A-AS1P86434 159 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 PSG7Q13046 419 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 GRPEL2Q8TAA5 225 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 SMIM4Q8WVI0 70 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 DVL3Q92997 716 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-208ENST00000468300 SPSB1Q96BD6 273 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 S100A16Q96FQ6 103 aaKnown RBP7.06□□□□□ -1.28
BRCA1-208ENST00000468300 NEDD4LQ96PU5 975 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 C11orf54Q9H0W9 315 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF581Q9P0T4 197 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 ESPL1Q14674 2120 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 ORC5O43913 435 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 CDC14BO60729 498 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 TGFAP01135 160 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 STAG3L2P0CL84 134 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 PRDX4Q13162 271 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 AWAT2Q6E213 333 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 WDR86Q86TI4 376 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 FAM89BQ8N5H3 189 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 SLC25A40Q8TBP6 338 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 OR5P3Q8WZ94 311 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 PIGCQ92535 297 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 FAM46BQ96A09 425 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 CMBLQ96DG6 245 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 METTL9Q9H1A3 318 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
BRCA1-208ENST00000468300 ELOVL5Q9NYP7 299 aa7.06□□□□□ -1.28
BRCA1-208ENST00000468300 EEF1E1-BLOC1S5C9J1V9 151 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 EEF1E1O43324 174 aaKnown RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 TMEM50BP56557 158 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 NAAAQ02083 359 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 KLF9Q13886 244 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 CEACAM21Q3KPI0 293 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 PLAC9Q5JTB6 97 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 TMEM69Q5SWH9 247 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 OR2T2Q6IF00 324 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 MRPL21Q7Z2W9 205 aaKnown RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 OR52I2Q8NH67 350 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 KLF14Q8TD94 323 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 HIF1ANQ9NWT6 349 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 KLK11Q9UBX7 282 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 RAB22AQ9UL26 194 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 PUS1Q9Y606 427 aaKnown RBP eCLIP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 FAM230AA0A1W2PPH8 454 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 SPRY1O43609 319 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 NXPH2O95156 264 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 H2AFB2P0C5Z0 115 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 CPT2P23786 658 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 NKX6-1P78426 367 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 GUCA2AQ02747 115 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 RBPJQ06330 500 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 MALLQ13021 153 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 CNN3Q15417 329 aaKnown RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF260Q3ZCT1 412 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 PAN3Q58A45 887 aaKnown RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 BAIAP2L2Q6UXY1 529 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 MOB3CQ70IA8 216 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 OR2W3Q7Z3T1 314 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 NRARPQ7Z6K4 114 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 GLCCI1Q86VQ1 547 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 OR10K1Q8NGX5 313 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 SETD6Q8TBK2 473 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 AQP3Q92482 292 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF479Q96JC4 524 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 PACRGQ96M98 296 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 HS3ST6Q96QI5 342 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 TRAF4Q9BUZ4 470 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ALX4Q9H161 411 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ATG5Q9H1Y0 275 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 BANF2Q9H503 90 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 NIT2Q9NQR4 276 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 TRGV8A0A0C4DH27 118 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 IQCF6A8MYZ5 107 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 C3orf80F5H4A9 247 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ANGPTL7O43827 346 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 LY86O95711 162 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF735P0CB33 412 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF83P51522 516 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 FUT6P51993 359 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 MTCP1P56278 107 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ACTBP60709 375 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 ACTG1P63261 375 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 OLFML2AQ68BL7 652 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 Q6ZR03 302 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 POC5Q8NA72 575 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 OR1J1Q8NGS3 322 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 RND1Q92730 232 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 OSGIN2Q9Y236 505 aa7.05□□□□□ -1.28
BRCA1-208ENST00000468300 F8VVB4 439 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 F8VWA3 439 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 H0YL77 283 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 GABARAPH6UMI1 98 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 SOCS1O15524 211 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 PTTG1O95997 202 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 SFTPBP07988 381 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 KIR2DL3P43628 341 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms