RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ST3GAL2Q16842 350 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 BTN2A1Q7KYR7 527 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 MAFIPQ8WZ33 124 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 MRPL24Q96A35 216 aaKnown RBP17.45■□□□□ 0.38
TMEM53-207ENST00000468117 ST6GALNAC5Q9BVH7 336 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 C20orf85Q9H1P6 137 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 UFSP2Q9NUQ7 469 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 NDRG3Q9UGV2 375 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 ANAPC10Q9UM13 185 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 ATP23Q9Y6H3 246 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 UBE2QL1A1L167 161 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A10PA6NDY2 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A18PA6NE21 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A16PA6NEW6 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A20PA6NIJ5 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A8PA6NJQ4 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A7PA6NKC0 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 A6NLC8 198 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A22PA8MWA6 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A12PA8MX19 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A5PA8MXJ8 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A23PA8MXZ1 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 CA11O75493 328 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 CSN2P05814 226 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A15PP0C7V4 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A13PP0C7W8 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A14PP0C7W9 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FAM90A24PP0C7X0 464 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 PGA5P0DJD9 388 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 HRH1P35367 487 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 SELENOVP59797 346 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 TLE1Q04724 770 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 IKZF1Q13422 519 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 POM121Q96HA1 1249 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 ESRP2Q9H6T0 727 aaKnown RBP17.45■□□□□ 0.38
TMEM53-207ENST00000468117 FLVCR2Q9UPI3 526 aa17.45■□□□□ 0.38
TMEM53-207ENST00000468117 AMY2AP04746 511 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 CBX5P45973 191 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 ERVK11-1P61568 191 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 NKPD1Q17RQ9 610 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 AGAP6Q5VW22 663 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 ELMOD3Q96FG2 381 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 PLPPR2Q96GM1 343 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 NRIP2Q9BQI9 281 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 NEURL2Q9BR09 285 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 PLK3Q9H4B4 646 aa17.44■□□□□ 0.38
TMEM53-207ENST00000468117 ZNF701Q9NV72 531 aaPredicted RBP17.44■□□□□ 0.38
TMEM53-207ENST00000468117 H2AFB2P0C5Z0 115 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 NAT1P18440 290 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 MPV17LQ2QL34 196 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 RNASE10Q5GAN6 216 aaKnown RBP17.43■□□□□ 0.38
TMEM53-207ENST00000468117 NCMAPQ5T1S8 102 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 OR4K15Q8NH41 348 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 LRRC46Q96FV0 321 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 CMSS1Q9BQ75 279 aaKnown RBP17.43■□□□□ 0.38
TMEM53-207ENST00000468117 TLNRD1Q9H1K6 362 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 ZNF442Q9H7R0 627 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 ALG5Q9Y673 324 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 SPRY3O43610 288 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 ZNF735P0CB33 412 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 RBMXP38159 391 aaKnown RBP17.43■□□□□ 0.38
TMEM53-207ENST00000468117 HOXA4Q00056 320 aaPredicted RBP17.43■□□□□ 0.38
TMEM53-207ENST00000468117 HOGA1Q86XE5 327 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 Q8IYB0 196 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 BPIFB2Q8N4F0 458 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 GALNT11Q8NCW6 608 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 BEST4Q8NFU0 473 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 SLC6A7Q99884 636 aa17.43■□□□□ 0.38
TMEM53-207ENST00000468117 FAM221AA4D161 298 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 HSPB6O14558 160 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 NDUFB6O95139 128 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 NXPH2O95156 264 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 PMP2P02689 132 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 BTG1P62324 171 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 MRPS15P82914 257 aaKnown RBP17.42■□□□□ 0.38
TMEM53-207ENST00000468117 ADIPOQQ15848 244 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 MICBQ29980 383 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 WDR82Q6UXN9 313 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 RHOFQ9HBH0 211 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 ABCA4P78363 2273 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.42■□□□□ 0.38
TMEM53-207ENST00000468117 PRSS44E7EML9 344 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 OR4A8P0C604 315 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 AMY2BP19961 511 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 CD200P41217 278 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 SORDQ00796 357 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 TFF3Q07654 80 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 CD300CQ08708 224 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 MZT1Q08AG7 82 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 MEF2DQ14814 521 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 RBMS2Q15434 407 aaKnown RBP17.42■□□□□ 0.38
TMEM53-207ENST00000468117 C4orf17Q53FE4 359 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 SPRNQ5BIV9 151 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 OR2V2Q96R30 315 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 GINS4Q9BRT9 223 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 BEX2Q9BXY8 128 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 BEX1Q9HBH7 125 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 RCC2Q9P258 522 aaKnown RBP17.42■□□□□ 0.38
TMEM53-207ENST00000468117 PLEKHA6Q9Y2H5 1048 aa17.42■□□□□ 0.38
TMEM53-207ENST00000468117 SHISA9B4DS77 424 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms