RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	GTF2F2	P13984	249 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	CPT2	P23786	658 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	IL2RG	P31785	369 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	CD200	P41217	278 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	OR3A4P	P47883	348 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	TMEM33	P57088	247 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	IL18	Q14116	193 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	RSU1	Q15404	277 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	ZNF181	Q2M3W8	571 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	PCGF3	Q3KNV8	242 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	NHLRC3	Q5JS37	347 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	CRIP3	Q6Q6R5	217 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	LINC00596	Q86U02	117 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	BHLHE23	Q8NDY6	225 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	OR56B1	Q8NGI3	324 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	OR51F2	Q8NH61	342 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	NPRL2	Q8WTW4	380 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	DEDD2	Q8WXF8	326 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	YIPF5	Q969M3	257 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	C1orf147	Q96MC9	270 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	TM2D1	Q9BX74	207 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	SRR	Q9GZT4	340 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	OR51I2	Q9H344	312 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663		V9GYH0	126 aa		10.16	□□□□□ -0.78
CTNS-205	ENST00000467663	TRAPPC2L	H3BP13	241 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	SULT1C2	O00338	296 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	CDC14B	O60729	498 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	NOS1AP	O75052	506 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	RP2	O75695	350 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	CFHR2	P36980	270 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	GPR6	P46095	362 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	HAAO	P46952	286 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	SRP9	P49458	86 aa	Known RBP	10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	MMP15	P51511	669 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	GPM6A	P51674	278 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	RPS27A	P62979	156 aa	Known RBP	10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	SSBP1	Q04837	148 aa	Known RBP	10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	ALKBH6	Q3KRA9	238 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	TMEM69	Q5SWH9	247 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	FAM120AOS	Q5T036	256 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	C16orf87	Q6PH81	154 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	FAM89B	Q8N5H3	189 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	LINC01356	Q8N9X3	169 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	OR4M1	Q8NGD0	313 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	SPATA3	Q8NHX4	192 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	SPACA5	Q96QH8	159 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	TLNRD1	Q9H1K6	362 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	ATG5	Q9H1Y0	275 aa		10.15	□□□□□ -0.78
CTNS-205	ENST00000467663	FBN1	P35555	2871 aa	Known RBP	10.15	□□□□□ -0.79
CTNS-205	ENST00000467663	MALRD1	Q5VYJ5	2156 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	IGKV1-27	A0A075B6S5	117 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663		A0A0B4J203	849 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	GSTZ1	O43708	216 aa	Predicted RBP	10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	CA11	O75493	328 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	UPK1B	O75841	260 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	CD55	P08174	381 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	MGMT	P16455	207 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	PMEL	P40967	661 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	GATA4	P43694	442 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	UNC119	Q13432	240 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	ZNF79	Q15937	498 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	SLC22A6	Q4U2R8	563 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	PYDC2	Q56P42	97 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	TMEM255A	Q5JRV8	349 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	SLC25A26	Q70HW3	274 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	OSR2	Q8N2R0	312 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	OR10Z1	Q8NGY1	313 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	CLDND2	Q8NHS1	167 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	SCPEP1	Q9HB40	452 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	ELL3	Q9HB65	397 aa	Predicted RBP	10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	IL19	Q9UHD0	177 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	COL6A5	A8TX70	2615 aa		10.14	□□□□□ -0.79
CTNS-205	ENST00000467663	GABARAP	H6UMI1	98 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	IFNL4	K9M1U5	179 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	MLNR	O43193	412 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	CRTAP	O75718	401 aa	Predicted RBP	10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	MPIG6B	O95866	241 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	GLA	P06280	429 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	MELTF	P08582	738 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	GSTP1	P09211	210 aa	Known RBP	10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	SRD5A1	P18405	259 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	TNFRSF1A	P19438	455 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	HNF1A	P20823	631 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	CDK2	P24941	298 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	ZNF81	P51508	661 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	PRSS12	P56730	875 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	DEFA1	P59665	94 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	DEFA3	P59666	94 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	FGF12	P61328	243 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	CCL8	P80075	99 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	SCN1B	Q07699	218 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	ZNF154	Q13106	437 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	IL13RA2	Q14627	380 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	PNLIPRP3	Q17RR3	467 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	MPV17L	Q2QL34	196 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	CR1L	Q2VPA4	569 aa		10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	HAGHL	Q6PII5	290 aa	Predicted RBP	10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	FIP1L1	Q6UN15	594 aa	Known RBP	10.13	□□□□□ -0.79
CTNS-205	ENST00000467663	CALHM1	Q8IU99	346 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms