RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 LOC389332A0A1B0GUA5 103 aa2.53□□□□□ -2
SMC4-208ENST00000467468 A0A1W2PRG6 482 aa2.53□□□□□ -2
SMC4-208ENST00000467468 A8MWL6 223 aa2.53□□□□□ -2
SMC4-208ENST00000467468 FFAR1O14842 300 aa2.53□□□□□ -2
SMC4-208ENST00000467468 SLC37A4O43826 429 aa2.53□□□□□ -2
SMC4-208ENST00000467468 OR2A4O95047 310 aa2.53□□□□□ -2
SMC4-208ENST00000467468 CYB5R3P00387 301 aaPredicted RBP2.53□□□□□ -2
SMC4-208ENST00000467468 IGKV3-11P04433 115 aa2.53□□□□□ -2
SMC4-208ENST00000467468 IGKV5-2P06315 115 aa2.53□□□□□ -2
SMC4-208ENST00000467468 CECR9P0C854 216 aa2.53□□□□□ -2
SMC4-208ENST00000467468 PSMB9P28065 219 aa2.53□□□□□ -2
SMC4-208ENST00000467468 CD40LGP29965 261 aa2.53□□□□□ -2
SMC4-208ENST00000467468 ACOT2P49753 483 aa2.53□□□□□ -2
SMC4-208ENST00000467468 EMP2P54851 167 aa2.53□□□□□ -2
SMC4-208ENST00000467468 PIGHQ14442 188 aaPredicted RBP2.53□□□□□ -2
SMC4-208ENST00000467468 ZNHIT3Q15649 155 aaPredicted RBP2.53□□□□□ -2
SMC4-208ENST00000467468 LUZP6Q538Z0 58 aa2.53□□□□□ -2
SMC4-208ENST00000467468 FAM222AQ5U5X8 452 aa2.53□□□□□ -2
SMC4-208ENST00000467468 FAM71E1Q6IPT2 247 aa2.53□□□□□ -2
SMC4-208ENST00000467468 NIPAL1Q6NVV3 410 aa2.53□□□□□ -2
SMC4-208ENST00000467468 MORN3Q6PF18 240 aaPredicted RBP2.53□□□□□ -2
SMC4-208ENST00000467468 ZNF695Q8IW36 515 aa2.53□□□□□ -2
SMC4-208ENST00000467468 ZNF101Q8IZC7 436 aa2.53□□□□□ -2
SMC4-208ENST00000467468 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2
SMC4-208ENST00000467468 FRZBQ92765 325 aa2.53□□□□□ -2
SMC4-208ENST00000467468 PPWD1Q96BP3 646 aaKnown RBP2.53□□□□□ -2
SMC4-208ENST00000467468 DDIT4LQ96D03 193 aa2.53□□□□□ -2
SMC4-208ENST00000467468 FAM210AQ96ND0 272 aa2.53□□□□□ -2
SMC4-208ENST00000467468 ZNF285Q96NJ3 590 aa2.53□□□□□ -2
SMC4-208ENST00000467468 RNF157Q96PX1 679 aa2.53□□□□□ -2
SMC4-208ENST00000467468 OR2A7Q96R45 310 aa2.53□□□□□ -2
SMC4-208ENST00000467468 DOK1Q99704 481 aa2.53□□□□□ -2
SMC4-208ENST00000467468 C7orf50Q9BRJ6 194 aaKnown RBP2.53□□□□□ -2
SMC4-208ENST00000467468 API5Q9BZZ5 524 aaKnown RBP2.53□□□□□ -2
SMC4-208ENST00000467468 PARVGQ9HBI0 331 aa2.53□□□□□ -2
SMC4-208ENST00000467468 SND1-IT1Q9HBX3 110 aa2.53□□□□□ -2
SMC4-208ENST00000467468 PARP11Q9NR21 331 aa2.53□□□□□ -2
SMC4-208ENST00000467468 IMP3Q9NV31 184 aaKnown RBP2.53□□□□□ -2
SMC4-208ENST00000467468 FBXL3Q9UKT7 428 aa2.53□□□□□ -2
SMC4-208ENST00000467468 PSMD13Q9UNM6 376 aa2.53□□□□□ -2
SMC4-208ENST00000467468 CBY1Q9Y3M2 126 aa2.53□□□□□ -2
SMC4-208ENST00000467468 IGKV1-6A0A0C4DH72 117 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 GOLGA6L10A6NI86 522 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 KLRC4-KLRK1H3BQV0 150 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 J3QLI3 93 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 SYNGR1O43759 233 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 MPZL2O60487 215 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 UGT2B11O75310 529 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 RAB36O95755 333 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 IGKV1-39P01597 117 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 IGKV1D-39P04432 117 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 MRPL3P09001 348 aaKnown RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 MUC1P15941 1255 aaPredicted RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 STC1P52823 247 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 CCL23P55773 120 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 PFN3P60673 137 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 RHOAP61586 193 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 HBG1P69891 147 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 HBG2P69892 147 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 ELF3P78545 371 aaPredicted RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 PRDX1Q06830 199 aaKnown RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 ZNF816Q0VGE8 651 aaPredicted RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 BNIP2Q12982 314 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 LINC00483Q53H64 154 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 KHDRBS2Q5VWX1 349 aaKnown RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 TIFABQ6ZNK6 161 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 FAM183BPQ6ZVS7 135 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 USP50Q70EL3 339 aaPredicted RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 PDPNQ86YL7 162 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 ZNF555Q8NEP9 628 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 ATP6V1C2Q8NEY4 427 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 OR52N1Q8NH53 320 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 ZNF420Q8TAQ5 688 aaPredicted RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 FAM57AQ8TBR7 257 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 DDI1Q8WTU0 396 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.52□□□□□ -2.011e-8■■■■■ 268.2
SMC4-208ENST00000467468 FMC1Q96HJ9 113 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 ING2Q9H160 280 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 ZSCAN16Q9H4T2 348 aaPredicted RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 DHX35Q9H5Z1 703 aaKnown RBP2.52□□□□□ -2.01
SMC4-208ENST00000467468 RHOFQ9HBH0 211 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 RDH14Q9HBH5 336 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 TAS2R13Q9NYV9 303 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 RBM12B-AS1Q9P1G2 102 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 OPN4Q9UHM6 478 aa2.52□□□□□ -2.01
SMC4-208ENST00000467468 PGPA6NDG6 321 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 CD300LBA8K4G0 201 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 C9J4A7 227 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 C9JQL5 133 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 GYG2O15488 501 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 PDCD6O75340 191 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 MPZL1O95297 269 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 PET100P0DJ07 73 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 M6PRP20645 277 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 ANP32AP39687 249 aaKnown RBP2.51□□□□□ -2.01
SMC4-208ENST00000467468 C1QTNF8P60827 252 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 RAB8AP61006 207 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 MEF2CQ06413 473 aaPredicted RBP2.51□□□□□ -2.01
SMC4-208ENST00000467468 SSX1Q16384 188 aa2.51□□□□□ -2.01
SMC4-208ENST00000467468 IGFL3Q6UXB1 125 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms