RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ZNF160Q9HCG1 818 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 AK3Q9UIJ7 227 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 DKKL1Q9UK85 242 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 MTCH2Q9Y6C9 303 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 WSB1Q9Y6I7 421 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 AQP7P3A6NL99 342 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 ZNF850A8MQ14 1090 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 SLC31A2O15432 143 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 QDPRP09417 244 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 MSR1P21757 451 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 DDTP30046 118 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 ERVFRD-1P60508 538 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 CYYR1Q96J86 154 aa13.54□□□□□ -0.24
CHD1L-205ENST00000467213 A0A1W2PPC4 97 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 TCRBV21S2A2A0A5A6 115 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 XRCC2O43543 280 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 PIAS2O75928 621 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 HLA-DRB3P79483 266 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 TMEM211Q6ICI0 200 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 SSX9Q7RTT3 188 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 NFAM1Q8NET5 270 aaPredicted RBP13.53□□□□□ -0.24
CHD1L-205ENST00000467213 CTDSP1Q9GZU7 261 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 MTIF3Q9H2K0 278 aaKnown RBP13.53□□□□□ -0.24
CHD1L-205ENST00000467213 ZNF286AQ9HBT8 521 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 CCDC187A0A096LP49 1063 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 A0A1B0GX78 115 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 E9PLN8 166 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 DVL1O14640 695 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 ANOS1P23352 680 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 CDAP32320 146 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 CCL20P78556 96 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 SPNS3Q6ZMD2 512 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 C1orf87Q8N0U7 546 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 SPSB2Q99619 263 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 TMEM222Q9H0R3 208 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 CERS4Q9HA82 394 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 PITPNC1Q9UKF7 332 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 MMP24Q9Y5R2 645 aa13.53□□□□□ -0.24
CHD1L-205ENST00000467213 UCP1P25874 307 aa13.52□□□□□ -0.24
CHD1L-205ENST00000467213 CLEC9AQ6UXN8 241 aa13.52□□□□□ -0.24
CHD1L-205ENST00000467213 ZNF100Q8IYN0 542 aa13.52□□□□□ -0.24
CHD1L-205ENST00000467213 IL22RA2Q969J5 263 aa13.52□□□□□ -0.24
CHD1L-205ENST00000467213 SMOC1Q9H4F8 434 aa13.52□□□□□ -0.24
CHD1L-205ENST00000467213 FOXD3Q9UJU5 478 aaPredicted RBP13.52□□□□□ -0.24
CHD1L-205ENST00000467213 IGLV3-12A0A075B6K2 115 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 SOD3P08294 240 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 NKX2-1P43699 371 aaPredicted RBP13.52□□□□□ -0.25
CHD1L-205ENST00000467213 FBXW4P57775 412 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 CNN3Q15417 329 aaKnown RBP13.52□□□□□ -0.25
CHD1L-205ENST00000467213 SP6Q3SY56 376 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 TMEM252Q8N6L7 170 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 OR5D18Q8NGL1 313 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 P2RX4Q99571 388 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 NKX2-4Q9H2Z4 354 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 ZNF391Q9UJN7 358 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 PIGLQ9Y2B2 252 aa13.52□□□□□ -0.25
CHD1L-205ENST00000467213 LOC102723971A0A1B0GUV8 181 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 IGSF23A1L1A6 192 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 PNLIPP16233 465 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 GABRR1P24046 479 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 HAGHQ16775 308 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 COA6Q5JTJ3 125 aaKnown RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 LHFPL2Q6ZUX7 228 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 KMT5CQ86Y97 462 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 H1FOOQ8IZA3 346 aaPredicted RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 SLC35G3Q8N808 338 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 OR1L3Q8NH93 324 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 RAB24Q969Q5 203 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 LIN37Q96GY3 246 aaPredicted RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 NOL4LQ96MY1 436 aaPredicted RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 NUDT22Q9BRQ3 303 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 CISD1Q9NZ45 108 aaKnown RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 HS3ST3B1Q9Y662 390 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 CDRT15L2A8MXV6 281 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 MPPED1O15442 326 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 CYB5R3P00387 301 aaPredicted RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 DBHP09172 617 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 FAHP16930 419 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 ID3Q02535 119 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 IL24Q13007 206 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 ENDOGQ14249 297 aaKnown RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 TAF9Q16594 264 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 BEND2Q8NDZ0 799 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 TOMM40LQ969M1 308 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 HDHD3Q9BSH5 251 aaPredicted RBP13.51□□□□□ -0.25
CHD1L-205ENST00000467213 FAAP24Q9BTP7 215 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 RP1P56715 2156 aa13.51□□□□□ -0.25
CHD1L-205ENST00000467213 C3orf85A0A1B0GTC6 90 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 ZNF727A8MUV8 499 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 H3BML4 177 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 CLDN34H7C241 214 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 OPN1MWP04001 364 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 OPN1MW2P0DN77 364 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 OPN1MW3P0DN78 364 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 GUCA1AP43080 201 aaPredicted RBP13.5□□□□□ -0.25
CHD1L-205ENST00000467213 H3F3AP84243 136 aa13.5□□□□□ -0.25
CHD1L-205ENST00000467213 FOXO1Q12778 655 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms