RNA–Protein interactions for RNA: ENST00000467078.5

APBB3-206, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 1 (best)

Gene APBB3, Length 1,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-206	ENST00000467078	RAB18	Q9NP72	206 aa		13.77	□□□□□ -0.21
APBB3-206	ENST00000467078	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
APBB3-206	ENST00000467078	ASF1B	Q9NVP2	202 aa		13.77	□□□□□ -0.21
APBB3-206	ENST00000467078	PGAM2	P15259	253 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	CCNO	P22674	350 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	IL32	P24001	234 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	EIF2S3	P41091	472 aa	Known RBP	13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	DEFA5	Q01523	94 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	CNN3	Q15417	329 aa	Known RBP	13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	ACSF3	Q4G176	576 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	NSUN5P2	Q63ZY6	315 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	C9orf106	Q8NAJ2	232 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	OR5D18	Q8NGL1	313 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	NANOS1	Q8WY41	292 aa	Known RBP	13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	SCGB3A2	Q96PL1	93 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	BANF2	Q9H503	90 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	C5orf66	Q9H5L9	145 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-206	ENST00000467078		A0A1W2PP11	408 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	FAM74A7	A6NL05	159 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	SOCS1	O15524	211 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	ATG12	O94817	140 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	NRAS	P01111	189 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	CCL2	P13500	99 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	KIR2DL2	P43627	348 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	FAM74A3	Q4VXF1	159 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	LHFPL1	Q86WI0	220 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	RNF126	Q9BV68	326 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	LHX6	Q9UPM6	363 aa		13.76	□□□□□ -0.21
APBB3-206	ENST00000467078	MGA	Q8IWI9	3026 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	MKRN2OS	H3BPM6	223 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	CRTAP	O75718	401 aa	Predicted RBP	13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	RAD51D	O75771	328 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	CNOT4	O95628	575 aa	Known RBP	13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	IGHV1-2	P23083	117 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	MTCP1	P56278	107 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	TMEM50B	P56557	158 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	OR2A2	Q6IF42	318 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	OR5H2	Q8NGV7	314 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	URM1	Q9BTM9	101 aa	Known RBP	13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	REPIN1	Q9BWE0	567 aa	Known RBP	13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	CYTL1	Q9NRR1	136 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	DKK4	Q9UBT3	224 aa		13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	PURG	Q9UJV8	347 aa	Known RBP	13.75	□□□□□ -0.21
APBB3-206	ENST00000467078	DCHS1	Q96JQ0	3298 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	C13orf42	A0A1B0GVH6	325 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	TMEM218	A2RU14	115 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	SIGLEC5	O15389	551 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	TGFBR3	Q03167	851 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	PRSS54	Q6PEW0	395 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	UNQ6126/PRO20091	Q6UXV3	157 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078		Q6ZT83	130 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	MDP1	Q86V88	176 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	SPACA3	Q8IXA5	215 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	BAP18	Q8IXM2	172 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	FAM89B	Q8N5H3	189 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	ARL11	Q969Q4	196 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	NARS2	Q96I59	477 aa	Known RBP	13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	OSGIN2	Q9Y236	505 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	IGKV1-27	A0A075B6S5	117 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078		H0YIZ8	118 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	NDUFA2	O43678	99 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	SERPINA5	P05154	406 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	APLNR	P35414	380 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	MALL	Q13021	153 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	CLEC18B	Q6UXF7	455 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	LHFPL2	Q6ZUX7	228 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	CNEP1R1	Q8N9A8	125 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	RRNAD1	Q96FB5	475 aa	Known RBP	13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	CPNE2	Q96FN4	548 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	ARHGAP5-AS1	Q96IT6	56 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	TECTB	Q96PL2	329 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	AQP10	Q96PS8	301 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	S100A13	Q99584	98 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	PCDHB16	Q9NRJ7	776 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	STARD10	Q9Y365	291 aa		13.74	□□□□□ -0.21
APBB3-206	ENST00000467078	FAM230A	A0A1W2PPH8	454 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	NGF	P01138	241 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	CRYAB	P02511	175 aa	Known RBP	13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	H2AFB1	P0C5Y9	115 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	AMY2B	P19961	511 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	RBP2	P50120	134 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	NPY4R	P50391	375 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	TAS2R46	P59540	309 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	SUPT4H1	P63272	117 aa	Known RBP	13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	FLI1	Q01543	452 aa	Predicted RBP	13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	C10orf91	Q5T1B1	145 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	ZNF585A	Q6P3V2	769 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	VWA1	Q6PCB0	445 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	SVBP	Q8N300	66 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	OR13G1	Q8NGZ3	307 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	RNF141	Q8WVD5	230 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	PIGC	Q92535	297 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	BORCS8	Q96FH0	119 aa		13.73	□□□□□ -0.21
APBB3-206	ENST00000467078	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms