RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 SLC34A1Q06495 639 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 PRAMEF5Q5TYX0 476 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 KDM4DQ6B0I6 523 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 ZNF676Q8N7Q3 588 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 CIB1Q99828 191 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 KRT8P05787 483 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 IGLL1P15814 213 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 VDAC2P45880 294 aaPredicted RBP16.49■□□□□ 0.23
COL6A1-203ENST00000466285 POU3F4P49335 361 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 DYNLT3P51808 116 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 ZNF85Q03923 595 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 GRK1Q15835 563 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 ATP6AP1Q15904 470 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 DNAL1Q4LDG9 190 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 TP53I3Q53FA7 332 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 FOXB2Q5VYV0 432 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 EGFL6Q8IUX8 553 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 RFT1Q96AA3 541 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 SNX22Q96L94 193 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 MNTQ99583 582 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 PRSS22Q9GZN4 317 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 GABARAPL1Q9H0R8 117 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 NECAP2Q9NVZ3 263 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 SESN1Q9Y6P5 492 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 RYR3Q15413 4870 aa16.49■□□□□ 0.23
COL6A1-203ENST00000466285 IGKV1-12A0A0C4DH73 117 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 FAM90A22PA8MWA6 464 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 ENTPD6O75354 484 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 IGKV1D-12P01611 117 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 GABRR1P24046 479 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 ISL1P61371 349 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 AMIGO2Q86SJ2 522 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 OR10H4Q8NGA5 316 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 OR10AC1Q8NH08 325 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 NDNFQ8TB73 568 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 SGCDQ92629 289 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 TMEM133Q9H2Q1 129 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 SLC7A11Q9UPY5 501 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 LINC00312Q9Y6C7 94 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 NBEAL2Q6ZNJ1 2754 aa16.48■□□□□ 0.23
COL6A1-203ENST00000466285 METTL15A6NJ78 407 aa16.47■□□□□ 0.23
COL6A1-203ENST00000466285 SIRPB1O00241 398 aa16.47■□□□□ 0.23
COL6A1-203ENST00000466285 DNAJC8O75937 253 aaPredicted RBP16.47■□□□□ 0.23
COL6A1-203ENST00000466285 GID4Q8IVV7 300 aa16.47■□□□□ 0.23
COL6A1-203ENST00000466285 SPACA5Q96QH8 159 aa16.47■□□□□ 0.23
COL6A1-203ENST00000466285 PRRG3Q9BZD7 231 aa16.47■□□□□ 0.23
COL6A1-203ENST00000466285 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.47■□□□□ 0.23
COL6A1-203ENST00000466285 H2AFY2Q9P0M6 372 aaPredicted RBP16.47■□□□□ 0.23
COL6A1-203ENST00000466285 hADV38S2A0JD32 116 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 AMY1AP04745 511 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 AMY2AP04746 511 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 HOXB6P17509 224 aaKnown RBP16.46■□□□□ 0.23
COL6A1-203ENST00000466285 HTR1FP30939 366 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 FUT6P51993 359 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 OR12D2P58182 307 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 NANOS3P60323 173 aaKnown RBP16.46■□□□□ 0.23
COL6A1-203ENST00000466285 CD83Q01151 205 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 MEF2CQ06413 473 aaPredicted RBP16.46■□□□□ 0.23
COL6A1-203ENST00000466285 BNIP1Q12981 228 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 ARSJQ5FYB0 599 aaPredicted RBP16.46■□□□□ 0.23
COL6A1-203ENST00000466285 REC114Q7Z4M0 266 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 OR4F17Q8NGA8 305 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 BORCS8Q96FH0 119 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 OR4F4Q96R69 305 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 CLEC7AQ9BXN2 247 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 ZNF286AQ9HBT8 521 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 WARS2Q9UGM6 360 aaKnown RBP16.46■□□□□ 0.23
COL6A1-203ENST00000466285 PITPNC1Q9UKF7 332 aa16.46■□□□□ 0.23
COL6A1-203ENST00000466285 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL6A1-203ENST00000466285 TRBV2A0A0J9YWF9 115 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 G3V2T6 193 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 XPNPEP2O43895 674 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 ALX3O95076 343 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 PRKACAP17612 351 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 P2RX3P56373 397 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 LOXL3P58215 753 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 MINOS1Q5TGZ0 78 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 CCDC121Q6ZUS5 278 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 FAM58AQ8N1B3 248 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 OR5AU1Q8NGC0 362 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 OR51A4Q8NGJ6 313 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 EME1Q96AY2 570 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 GNG8Q9UK08 70 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 MINOS1-NBL1R4GNA1 71 aa16.45■□□□□ 0.22
COL6A1-203ENST00000466285 K7EIL1 84 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 PEX14O75381 377 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 GATBO75879 557 aaKnown RBP16.44■□□□□ 0.22
COL6A1-203ENST00000466285 OR2T7P0C7T2 308 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 AZGP1P25311 298 aaKnown RBP16.44■□□□□ 0.22
COL6A1-203ENST00000466285 PEX2P28328 305 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 GLIPR1P48060 266 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 EMX1Q04741 257 aaPredicted RBP16.44■□□□□ 0.22
COL6A1-203ENST00000466285 TRAPPC6BQ86SZ2 158 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 OR5D18Q8NGL1 313 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 RIBC2Q9H4K1 309 aa16.44■□□□□ 0.22
COL6A1-203ENST00000466285 MPIG6BO95866 241 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 OR2H2O95918 312 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 LPLP06858 475 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 KRTAP10-11P60412 298 aa16.43■□□□□ 0.22
COL6A1-203ENST00000466285 ACTR3P61158 418 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms