RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RMND1Q9NWS8 449 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 DNAJC27Q9NZQ0 273 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 ZNF229Q9UJW7 825 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 RBMX2Q9Y388 322 aaKnown RBP2.1□□□□□ -2.07
CLK1-208ENST00000464454 ZNF780BQ9Y6R6 833 aa2.1□□□□□ -2.07
CLK1-208ENST00000464454 MGAT4DA6NG13 374 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 ZNF233A6NK53 670 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 COX7A2P2O60397 106 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 APOA1P02647 267 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 IMPA1P29218 277 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 CCL23P55773 120 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 BNIP2Q12982 314 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 TNXAQ16473 311 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 CEACAM16Q2WEN9 425 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 UBE2NLQ5JXB2 153 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 FAM19A1Q7Z5A9 133 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 LINC00596Q86U02 117 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 OR8K3Q8NH51 312 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 BLNKQ8WV28 456 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 NELFBQ8WX92 580 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 RBPMSQ93062 196 aaKnown RBP2.09□□□□□ -2.07
CLK1-208ENST00000464454 ZNF396Q96N95 335 aaPredicted RBP2.09□□□□□ -2.07
CLK1-208ENST00000464454 YPEL4Q96NS1 127 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 PRRG3Q9BZD7 231 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 VSIRQ9H7M9 311 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 TRIM45Q9H8W5 580 aaPredicted RBP2.09□□□□□ -2.07
CLK1-208ENST00000464454 DIABLOQ9NR28 239 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 TAS2R1Q9NYW7 299 aa2.09□□□□□ -2.07
CLK1-208ENST00000464454 LOC100506127A0A0U1RQW1 187 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 CD300LBA8K4G0 201 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 IGLL5B9A064 214 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 hCG_2039718K7EN88 272 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 IGHG2P01859 326 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 RAB38P57729 211 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 VSNL1P62760 191 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 GPR176Q14439 515 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 ZNF235Q14590 738 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 Q3ZCU0 254 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 Q499Y3 187 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 TTMPQ5BVD1 217 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 CLEC18BQ6UXF7 455 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 SSX6Q7RTT6 188 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 ZFP62Q8NB50 900 aaPredicted RBP2.08□□□□□ -2.08
CLK1-208ENST00000464454 DRAXINQ8NBI3 349 aaPredicted RBP2.08□□□□□ -2.08
CLK1-208ENST00000464454 CLHC1Q8NHS4 586 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 TNFRSF14Q92956 283 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 ZBED3Q96IU2 234 aaPredicted RBP2.08□□□□□ -2.08
CLK1-208ENST00000464454 AGPAT3Q9NRZ7 376 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 CLEC2DQ9UHP7 191 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 SHROOM3Q8TF72 1996 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 NOS1P29475 1434 aa2.08□□□□□ -2.08
CLK1-208ENST00000464454 A0A1B0GW15 77 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 K7EPK0 472 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 IGKV4-1P06312 121 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 INAFM2P0DMQ5 153 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 PTHLHP12272 177 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 CCL2P13500 99 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 IL12BP29460 328 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 ACOT2P49753 483 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 TSPAN5P62079 268 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 FMODQ06828 376 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 FBXO48Q5FWF7 155 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 LIN9Q5TKA1 542 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 ZNF773Q6PK81 442 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 TMEM144Q7Z5S9 345 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 OR8G5Q8NG78 346 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 C19orf60Q96EN9 201 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 TVP23CQ96ET8 276 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 OR2V2Q96R30 315 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 PLA2G12AQ9BZM1 189 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 TMBIM4Q9HC24 238 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 ZNF492Q9P255 531 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 SLC22A14Q9Y267 594 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 TRAPPC1Q9Y5R8 145 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 ZNF706Q9Y5V0 76 aaPredicted RBP2.07□□□□□ -2.08
CLK1-208ENST00000464454 NRCAMQ92823 1304 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 PLXNB3Q9ULL4 1909 aa2.07□□□□□ -2.08
CLK1-208ENST00000464454 BAZ1BQ9UIG0 1483 aaKnown RBP2.07□□□□□ -2.08
CLK1-208ENST00000464454 IGKV3D-11A0A0A0MRZ8 115 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 RBFOX3A6NFN3 312 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 ZNF879B4DU55 563 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 C4orf51C9J302 202 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 GYG2O15488 501 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 KLHL2O95198 593 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 SCGB1C2P0DMR2 95 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 MLNP12872 115 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 ZNF35P13682 527 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 ENDOGQ14249 297 aaKnown RBP2.06□□□□□ -2.08
CLK1-208ENST00000464454 PSG3Q16557 428 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 ACTBL2Q562R1 376 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 LDLRAD2Q5SZI1 272 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 HBMQ6B0K9 141 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 USP50Q70EL3 339 aaPredicted RBP2.06□□□□□ -2.08
CLK1-208ENST00000464454 PAGE2Q7Z2X7 111 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 OR4K17Q8NGC6 315 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 OR4C13Q8NGP0 309 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 OR6K3Q8NGY3 331 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 SCGB1C1Q8TD33 95 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 FMC1Q96HJ9 113 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 GOLPH3Q9H4A6 298 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms