RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ZNF442Q9H7R0 627 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 PROCRQ9UNN8 238 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 MPC1Q9Y5U8 109 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 PRR14LQ5THK1 2151 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 MAP1BP46821 2468 aaKnown RBP10.94□□□□□ -0.66
VAPB-203ENST00000463370 FXYD6-FXYD2A0A087WZ82 144 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 ARPC5O15511 151 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 CBR1P16152 277 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 PSG7Q13046 419 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 FAHD2BQ6P2I3 314 aaPredicted RBP10.94□□□□□ -0.66
VAPB-203ENST00000463370 CCDC36Q8IYA8 594 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 FAHD2AQ96GK7 314 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 DPCDQ9BVM2 203 aaPredicted RBP10.94□□□□□ -0.66
VAPB-203ENST00000463370 FXYD6Q9H0Q3 95 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 WASF3Q9UPY6 502 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 MCRIP1C9JLW8 97 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 RRP8O43159 456 aaKnown RBP10.94□□□□□ -0.66
VAPB-203ENST00000463370 DUS4LO95620 317 aaKnown RBP10.94□□□□□ -0.66
VAPB-203ENST00000463370 CFDP00746 253 aaPredicted RBP10.94□□□□□ -0.66
VAPB-203ENST00000463370 CECR9P0C854 216 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 OR5H8P0DN80 308 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 RPS2P15880 293 aaKnown RBP10.94□□□□□ -0.66
VAPB-203ENST00000463370 DTYMKP23919 212 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 HTR2BP41595 481 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 GNG3P63215 75 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 NHLH1Q02575 133 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 SLC9A3R2Q15599 337 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 TMEM128Q5BJH2 165 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 SLC22A25Q6T423 547 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 CLEC18BQ6UXF7 455 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 TMEM17Q86X19 198 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 SAXO1Q8IYX7 474 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 TMEM185AQ8NFB2 350 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 PHB2Q99623 299 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 OR51I2Q9H344 312 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 TP53TG5Q9Y2B4 290 aa10.94□□□□□ -0.66
VAPB-203ENST00000463370 FAM25EA8MYX2 175 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 H0YL77 283 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 TRAPPC2LH3BP13 241 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 PRKACAP17612 351 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 NFYAP23511 347 aaPredicted RBP10.93□□□□□ -0.66
VAPB-203ENST00000463370 CALCRP30988 508 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 HOXC12P31275 282 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 RBMXP38159 391 aaKnown RBP10.93□□□□□ -0.66
VAPB-203ENST00000463370 SEC61A1P61619 476 aaKnown RBP10.93□□□□□ -0.66
VAPB-203ENST00000463370 MRPL49Q13405 166 aaKnown RBP10.93□□□□□ -0.66
VAPB-203ENST00000463370 LRRC37A5PQ49AS3 106 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 ZNF474Q6S9Z5 364 aaPredicted RBP10.93□□□□□ -0.66
VAPB-203ENST00000463370 TEX261Q6UWH6 196 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 C1orf162Q8NEQ5 155 aaPredicted RBP10.93□□□□□ -0.66
VAPB-203ENST00000463370 EXTL1Q92935 676 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 C12orf4Q9NQ89 552 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 PCDHB16Q9NRJ7 776 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 FZR1Q9UM11 496 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 EDARQ9UNE0 448 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 U3KQ87 197 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 ACACAQ13085 2346 aa10.93□□□□□ -0.66
VAPB-203ENST00000463370 DBX1A6NMT0 343 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 MKRN2OSH3BPM6 223 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 KNG1P01042 644 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 PTGER4P35408 488 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 HOXA4Q00056 320 aaPredicted RBP10.92□□□□□ -0.66
VAPB-203ENST00000463370 ANKRD55Q3KP44 614 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 MKXQ8IYA7 352 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 LILRB4Q8NHJ6 448 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 KLF14Q8TD94 323 aaPredicted RBP10.92□□□□□ -0.66
VAPB-203ENST00000463370 BOD1Q96IK1 185 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 WDR13Q9H1Z4 485 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 RELNP78509 3460 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 OR5B21A6NL26 309 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 MPTX1A8MV57 137 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 ERVH48-1M5A8F1 160 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 IKZF1Q13422 519 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 ZNF573Q86YE8 665 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 ZNF680Q8NEM1 530 aa10.92□□□□□ -0.66
VAPB-203ENST00000463370 RCC2Q9P258 522 aaKnown RBP10.92□□□□□ -0.66
VAPB-203ENST00000463370 RP1L1Q8IWN7 2480 aaPredicted RBP10.92□□□□□ -0.66
VAPB-203ENST00000463370 NBEAQ8NFP9 2946 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 IGHV1-18A0A0C4DH31 117 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 J3QW42 95 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 ADAP1O75689 374 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 RGS11O94810 467 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 SFT2D2O95562 160 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 CD8AP01732 235 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 PGAM2P15259 253 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 TAS2R31P59538 309 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 GMFBP60983 142 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 OPCMLQ14982 345 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 NDUFA5Q16718 116 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 NHLRC3Q5JS37 347 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 BHLHA15Q7RTS1 189 aaPredicted RBP10.91□□□□□ -0.66
VAPB-203ENST00000463370 FAM219AQ8IW50 185 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 PDCD10Q9BUL8 212 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 EEF1E1-BLOC1S5C9J1V9 151 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 L7N2F9 121 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 IGLV1-44P01699 117 aa10.91□□□□□ -0.66
VAPB-203ENST00000463370 CRYABP02511 175 aaKnown RBP10.91□□□□□ -0.66
VAPB-203ENST00000463370 HOXB1P14653 301 aaPredicted RBP10.91□□□□□ -0.66
VAPB-203ENST00000463370 RAC2P15153 192 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms