RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MUCL1Q96DR8 90 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 RNF125Q96EQ8 232 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 DIRAS2Q96HU8 199 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 FAM210AQ96ND0 272 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 NPFFR1Q9GZQ6 430 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 TMEM138Q9NPI0 162 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 PTTG3PQ9NZH4 202 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 SPATA2Q9UM82 520 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 SLC25A15Q9Y619 301 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 SETXQ7Z333 2677 aaKnown RBP6.23□□□□□ -1.41
UBE4B-204ENST00000462658 PTPN13Q12923 2485 aa6.23□□□□□ -1.41
UBE4B-204ENST00000462658 IGHV1-18A0A0C4DH31 117 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 FABP12A6NFH5 140 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 GGT3PA6NGU5 568 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 C16orf97H3BN30 126 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 IGLV1-44P01699 117 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 ALDOBP05062 364 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 ELK1P19419 428 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 HTR2CP28335 458 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 CD40LGP29965 261 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 GPR12P47775 334 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 PPP5CP53041 499 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 TNK1Q13470 666 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 GK2Q14410 553 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 PPA1Q15181 289 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 P2RY14Q15391 338 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 OR8B8Q15620 311 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 UBE2V2Q15819 145 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 C1orf100Q5SVJ3 147 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 CLVS2Q5SYC1 327 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 C1QTNF12Q5T7M4 302 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 FAM166AQ6J272 317 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 C16orf87Q6PH81 154 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 FAM131AQ6UXB0 335 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 MRPL21Q7Z2W9 205 aaKnown RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 LRRC28Q86X40 367 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 LYPD6Q86Y78 171 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 CDH26Q8IXH8 852 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF101Q8IZC7 436 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 OR5AS1Q8N127 324 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 Q8N9P0 234 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 OR6M1Q8NGM8 313 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 LGALS14Q8TCE9 139 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 ITFG2Q969R8 447 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 TMEM18Q96B42 140 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 CMTM3Q96MX0 182 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 NKX3-1Q99801 234 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 UQCC2Q9BRT2 126 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 ACTR6Q9GZN1 396 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 CHST5Q9GZS9 411 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 OR51B6Q9H340 312 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 OPA3Q9H6K4 179 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 GPR173Q9NS66 373 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 CYSLTR2Q9NS75 346 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 BEX4Q9NWD9 120 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 SLC25A10Q9UBX3 287 aaPredicted RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 OR5V1Q9UGF6 321 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 AKAP9Q99996 3911 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 UTP20O75691 2785 aaKnown RBP6.22□□□□□ -1.41
UBE4B-204ENST00000462658 DOPEY2Q9Y3R5 2298 aa6.22□□□□□ -1.41
UBE4B-204ENST00000462658 IGHV2OR16-5A0A0B4J2B6 119 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 IGKV1-9A0A0C4DH69 117 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 ZNF816-ZNF321PA0A0X1KG74 233 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 CBY3A6NI87 242 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 GMDSO60547 372 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 SMPD2O60906 423 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 NRASP01111 189 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 APOA1P02647 267 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 EIF4EP06730 217 aaKnown RBP6.21□□□□□ -1.42
UBE4B-204ENST00000462658 HCKP08631 526 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 CECR9P0C854 216 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 ZNF35P13682 527 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 PRKACBP22694 351 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 AZGP1P25311 298 aaKnown RBP6.21□□□□□ -1.42
UBE4B-204ENST00000462658 PTBP1P26599 531 aaKnown RBP eCLIP6.21□□□□□ -1.42
UBE4B-204ENST00000462658 ZNF93P35789 620 aaPredicted RBP6.21□□□□□ -1.42
UBE4B-204ENST00000462658 TALDO1P37837 337 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 RAD52P43351 418 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 RANBP1P43487 201 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 ZNF83P51522 516 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 UCP2P55851 309 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 PPP1CBP62140 327 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 TAB1Q15750 504 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 C2orf76Q3KRA6 126 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 DMRTC1Q5HYR2 192 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 UBE2NLQ5JXB2 153 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 TMEM42Q69YG0 159 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 CNIH2Q6PI25 160 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 XKRXQ6PP77 449 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 METAP1DQ6UB28 335 aaPredicted RBP6.21□□□□□ -1.42
UBE4B-204ENST00000462658 UNQ6126/PRO20091Q6UXV3 157 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 RFPL4BQ6ZWI9 263 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 OR51D1Q8NGF3 324 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 OR56B2PQ8NGI1 322 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 NPRL2Q8WTW4 380 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 PIGCQ92535 297 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 FAM3DQ96BQ1 224 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 SPACA5Q96QH8 159 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 GPER1Q99527 375 aa6.21□□□□□ -1.42
UBE4B-204ENST00000462658 SOSTQ9BQB4 213 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms