RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 TGIF1Q15583 401 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OR8G1Q15617 311 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TAF9Q16594 264 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF674Q2M3X9 581 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 SP6Q3SY56 376 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HIKESHIQ53FT3 197 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 SPIN3Q5JUX0 258 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF506Q5JVG8 444 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 DNLZQ5SXM8 178 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HIST2H3PS2Q5TEC6 136 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RAET1LQ5VY80 246 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 PLCXD3Q63HM9 321 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TMEM211Q6ICI0 200 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ADAM5Q6NVV9 412 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 CRIP3Q6Q6R5 217 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 WDR5BQ86VZ2 330 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF695Q8IW36 515 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 C20orf196Q8IYI0 205 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF100Q8IYN0 542 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TMEM123Q8N131 208 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 FBXL14Q8N1E6 418 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 FAM24BQ8N5W8 94 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OR2C3Q8N628 320 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 LINC00469Q8N7U9 141 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OR52M1Q8NGK5 317 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OR2G3Q8NGZ4 309 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OR1F12Q8NHA8 337 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HPSE2Q8WWQ2 592 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 SLAMF9Q96A28 289 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 NABP1Q96AH0 204 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF775Q96BV0 537 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MSI2Q96DH6 328 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RBMXL1Q96E39 390 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 FBXO17Q96EF6 278 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 BSCL2Q96G97 398 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MARS2Q96GW9 593 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 BOD1Q96IK1 185 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 GNRHR2Q96P88 292 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 IP6K3Q96PC2 410 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TECTBQ96PL2 329 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 NOTCH4Q99466 2003 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ATP5SQ99766 215 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 WDR77Q9BQA1 342 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MESP1Q9BRJ9 268 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 NIPSNAP3BQ9BS92 247 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 FAAP24Q9BTP7 215 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 PAPOLGQ9BWT3 736 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RBM24Q9BX46 236 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TOLLIPQ9H0E2 274 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 SH3BGRL3Q9H299 93 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF442Q9H7R0 627 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 PLEKHF2Q9H8W4 249 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 LYRM2Q9NU23 88 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 GFOD1Q9NXC2 390 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 KIAA1456Q9P272 454 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MYOTQ9UBF9 498 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RARRES3Q9UL19 164 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 UBE2J1Q9Y385 318 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MTCL1Q9Y4B5 1905 aaKnown RBP3.05□□□□□ -1.92
COL8A1-204ENST00000462604 CCDC187A0A096LP49 1063 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 IGHV3-15A0A0B4J1V0 119 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF816-ZNF321PA0A0X1KG74 233 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 KIR2DS1A0A191URI9 304 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 IGSF23A1L1A6 192 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 NKX2-6A6NCS4 301 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A10PA6NDY2 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A18PA6NE21 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A16PA6NEW6 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 OR6C6A6NF89 314 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM24AA6NFZ4 105 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A20PA6NIJ5 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A8PA6NJQ4 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A7PA6NKC0 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 SHISA7A6NL88 538 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF724A8MTY0 619 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A22PA8MWA6 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A12PA8MX19 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A5PA8MXJ8 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 FAM90A23PA8MXZ1 464 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 B4DEV8 164 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF732B4DXR9 585 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 SEC14L6B5MCN3 397 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF587BE7ETH6 402 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 E9PLN8 166 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 H3BQ15 152 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 RPL36A-HNRNPH2H7BZ11 118 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 TERTO14746 1132 aaKnown RBP3.05□□□□□ -1.92
COL8A1-204ENST00000462604 HSD17B6O14756 317 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 GEMIN2O14893 280 aaKnown RBP3.05□□□□□ -1.92
COL8A1-204ENST00000462604 PPP1R2P9O14990 202 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 MPPED1O15442 326 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 PPIHO43447 177 aaKnown RBP3.05□□□□□ -1.92
COL8A1-204ENST00000462604 ADAM20O43506 726 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 DNPH1O43598 174 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 GALR2O43603 387 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-204ENST00000462604 SPRY1O43609 319 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-204ENST00000462604 ANGPTL7O43827 346 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 SSSCA1O60232 199 aa3.05□□□□□ -1.92
COL8A1-204ENST00000462604 OR7C1O76099 320 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-204ENST00000462604 SCAF4O95104 1147 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms