RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 C11orf94C9JXX5 98 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 M0R296 226 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 ACTL6AO96019 429 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 YBX1P67809 324 aaKnown RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 CCL7P80098 99 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 SURF2Q15527 256 aaPredicted RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 KHDC3LQ587J8 217 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 MUC20Q8N307 709 aaPredicted RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 PLPPR2Q96GM1 343 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PDFQ9HBH1 243 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 SIRT7Q9NRC8 400 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 MYH15Q9Y2K3 1946 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PLPP2O43688 288 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 OR5AC1P0C628 307 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 KIR3DL2P43630 455 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 FGF8P55075 233 aaPredicted RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 GFERP55789 205 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 TCTAP57738 103 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 TBC1D26Q86UD7 250 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 CA5BP1Q8WTZ4 195 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 CCL17Q92583 94 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 R3HDM4Q96D70 268 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 MS4A4AQ96JQ5 239 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 NUDT16L1Q9BRJ7 211 aaKnown RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 IFITM10A6NMD0 228 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 CTAG2O75638 210 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 WNT1P04628 370 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 MRPS11P82912 194 aaKnown RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 ST3GAL2Q16842 350 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 C6orf201Q7Z4U5 140 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 TMEM179BQ7Z7N9 219 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 SPEM1Q8N4L4 309 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 OR1N2Q8NGR9 330 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 FGF14Q92915 247 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 C4orf45Q96LM5 186 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PRSS50Q9UI38 385 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 TMEM265A0A087WTH1 108 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 TRBV5-4A0A0C4DH59 114 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 OOEPA6NGQ2 149 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 HPXP02790 462 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PGA4P0DJD7 388 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PGA5P0DJD9 388 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PPP1CCP36873 323 aaKnown RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 DYNLT3P51808 116 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 TAS2R60P59551 318 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 C19orf54Q5BKX5 351 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PNPLA5Q7Z6Z6 429 aaPredicted RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 MUC15Q8N387 334 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 NUDT8Q8WV74 236 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 MCHR2Q969V1 340 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 SNRNP40Q96DI7 357 aaKnown RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 STARD4Q96DR4 205 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 CNRIP1Q96F85 164 aaPredicted RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 MRGPRX1Q96LB2 322 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 PACRGQ96M98 296 aaPredicted RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 OR2J1Q9GZK6 312 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 ARRDC1-AS1Q9H2J1 176 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 IL20Q9NYY1 176 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 VAX2Q9UIW0 290 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 EXOGQ9Y2C4 368 aaKnown RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 RER1O15258 196 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 MNX1P50219 401 aaPredicted RBP8□□□□□ -1.13
BRCA1-205ENST00000461221 PPP2CBP62714 309 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 ASCL5Q7RTU5 278 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 RFESDQ8TAC1 157 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 DYNLRB2Q8TF09 96 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 GLRX2Q9NS18 164 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 CDC42EP3Q9UKI2 254 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 CES1P1Q9UKY3 287 aa8□□□□□ -1.13
BRCA1-205ENST00000461221 APCSP02743 223 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 ZXDAP98168 799 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 RELBQ01201 579 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 PSG5Q15238 335 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 PABPC1L2AQ5JQF8 200 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 SIGIRRQ6IA17 410 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 LPAR5Q9H1C0 372 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 IGHV3-43A0A0B4J1X8 118 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 FAM74A7A6NL05 159 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 PRRT4C9JH25 899 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 K7ERU9 68 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 RNF224P0DH78 156 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 IGHV3-43DP0DP04 118 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 FAM27D1Q5T7N8 215 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 OTPQ5XKR4 325 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 RNF165Q6ZSG1 346 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 ZNF683Q8IZ20 524 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 MRGPRDQ8TDS7 321 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 COPS9Q8WXC6 57 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 OR4C12Q96R67 309 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 VSIG4Q9Y279 399 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 KCNE3Q9Y6H6 103 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 SYNGR2O43760 224 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 SMIM6P0DI80 62 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 ZNF117Q03924 483 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 FOXC1Q12948 553 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 SPINK9Q5DT21 86 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 C10orf113Q5VZT2 155 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 FAM219AQ8IW50 185 aa7.99□□□□□ -1.13
BRCA1-205ENST00000461221 STPG2Q8N412 459 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms