RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 CNR1P21554 472 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 F2RP25116 425 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 LOXP28300 417 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 ARL2P36404 184 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PSMD8P48556 350 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 CAV2P51636 162 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 XKP51811 444 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 MLF1P58340 268 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 IFITM2Q01629 132 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 DGCR6Q14129 220 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 ZNF266Q14584 549 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 STEAP4Q687X5 459 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 DCUN1D2Q6PH85 259 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TTC33Q6PID6 262 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 TGIF2LYQ8IUE0 185 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 GPD1LQ8N335 351 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 C20orf203Q8NBC4 194 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 CHST4Q8NCG5 386 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TMEM161BQ8NDZ6 487 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 ZNF738Q8NE65 137 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 OR10W1Q8NGF6 305 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TMA16Q96EY4 203 aaKnown RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 C16orf74Q96GX8 76 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TMEM101Q96IK0 257 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 EBNA1BP2Q99848 306 aaKnown RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 RASL11BQ9BPW5 248 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PYGO2Q9BRQ0 406 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 C1orf50Q9BV19 199 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 NANOGQ9H9S0 305 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 SLC38A10Q9HBR0 1119 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TMEM216Q9P0N5 145 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 ZNF629Q9UEG4 869 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 CBY1Q9Y3M2 126 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 MRPS18BQ9Y676 258 aaKnown RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 SCN9AQ15858 1988 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 DOCK1Q14185 1865 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 COL11A1P12107 1806 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 A0A0G2JMZ2 1700 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 LRRC37A2A6NM11 1700 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 SRCAPQ6ZRS2 3230 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 NUP205Q92621 2012 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 A0A0G2JN53 185 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 A0A1W2PQ67 120 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TMEM150BA6NC51 233 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PRORSD1PA6NEY8 169 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 CLDN25C9JDP6 229 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 KRTAP4-16G5E9R7 235 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 HDAC3O15379 428 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 GATCO43716 136 aaKnown RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 NPIPB7O75200 414 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 RDH16O75452 317 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 ADAP1O75689 374 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 LYPLA2O95372 231 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PTTG1O95997 202 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 IGHV3-43DP0DP04 118 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 GABRR1P24046 479 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PFN2P35080 140 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 POLR2IP36954 125 aaKnown RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 CEACAM3P40198 252 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 MAGEA12P43365 314 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PPICP45877 212 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 CDC34P49427 236 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 NCBP2P52298 156 aaKnown RBP eCLIP2.12□□□□□ -2.07
HPS3-203ENST00000460822 BLVRAP53004 296 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TMBIM6P55061 237 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 OR2B8PP59922 312 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PSME3P61289 254 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 TSPAN5P62079 268 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 IFITM3Q01628 133 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 ZNF846Q147U1 533 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 HERPUD1Q15011 391 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 NEDD8Q15843 81 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 ZNF630Q2M218 657 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 CDKL4Q5MAI5 379 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 OR2T5Q6IEZ7 315 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 FRMPD2BQ6IN97 320 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 FAM151BQ6UXP7 276 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 P2RY8Q86VZ1 359 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 RAB43Q86YS6 212 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 SNX29P2Q8IUI4 249 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 CA13Q8N1Q1 262 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PACRGLQ8N7B6 248 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 LRRC52Q8N7C0 313 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 NECAP1Q8NC96 275 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 OR10J6PQ8NGY7 276 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 OR2T29Q8NH02 315 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 JOSD2Q8TAC2 188 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 RAB2BQ8WUD1 216 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 LRRC29Q8WV35 223 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PPWD1Q96BP3 646 aaKnown RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 PPP1R36Q96LQ0 422 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 RNF145Q96MT1 663 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 PEBP4Q96S96 227 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 GABRG3Q99928 467 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 NRIP2Q9BQI9 281 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 SAV1Q9H4B6 383 aaPredicted RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 WDR54Q9H977 334 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 EFCAB1Q9HAE3 211 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 HMG20AQ9NP66 347 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 FBXO8Q9NRD0 319 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 299.1 ms