RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 ANXA10Q9UJ72 324 aa10.21□□□□□ -0.78
CPSF3-202ENST00000460593 GAB2Q9UQC2 676 aa10.21□□□□□ -0.78
CPSF3-202ENST00000460593 TMED3Q9Y3Q3 217 aa10.21□□□□□ -0.78
CPSF3-202ENST00000460593 UNC13CQ8NB66 2214 aa10.21□□□□□ -0.78
CPSF3-202ENST00000460593 FRG2CA6NGY1 282 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 FOXI3A8MTJ6 420 aaPredicted RBP10.2□□□□□ -0.78
CPSF3-202ENST00000460593 ALG1L2C9J202 215 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 IFNA10P01566 189 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 OR4A8P0C604 315 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 FOLR1P15328 257 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 DYNLT3P51808 116 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 CLDN17P56750 224 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 NUTF2P61970 127 aaKnown RBP10.2□□□□□ -0.78
CPSF3-202ENST00000460593 KIAA2026Q5HYC2 2103 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 H1FNTQ75WM6 255 aaPredicted RBP10.2□□□□□ -0.78
CPSF3-202ENST00000460593 FBXL14Q8N1E6 418 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 OR2C3Q8N628 320 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 NUDT16L1Q9BRJ7 211 aaKnown RBP10.2□□□□□ -0.78
CPSF3-202ENST00000460593 A0A1W2PNR3 127 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 A6NNC1 897 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 IGHMP01871 453 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 HLA-HP01893 362 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 CD200P41217 278 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 HLA-DRB3P79483 266 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 ZNF154Q13106 437 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 FAM89BQ8N5H3 189 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 SLC38A9Q8NBW4 561 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 PLPP5Q8NEB5 264 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 LFNGQ8NES3 379 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 OR4X1Q8NH49 305 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 M1APQ8TC57 530 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 GPR87Q9BY21 358 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 TWSG1Q9GZX9 223 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 DCAF16Q9NXF7 216 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 ELOA3CA0A087WX78 387 aaPredicted RBP10.2□□□□□ -0.78
CPSF3-202ENST00000460593 ZNF814B7Z6K7 855 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 TSPAN2O60636 221 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 CLRN1P58418 232 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 SLC22A25Q6T423 547 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 LCN15Q6UWW0 184 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 LANCL3Q6ZV70 420 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 C1orf87Q8N0U7 546 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 WWTR1Q9GZV5 400 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 WNT16Q9UBV4 365 aa10.2□□□□□ -0.78
CPSF3-202ENST00000460593 PNLIPP16233 465 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 DUSP1P28562 367 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 MNX1P50219 401 aaPredicted RBP10.19□□□□□ -0.78
CPSF3-202ENST00000460593 DAP3P51398 398 aaKnown RBP10.19□□□□□ -0.78
CPSF3-202ENST00000460593 FBXW4P57775 412 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 COL10A1Q03692 680 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 GNMTQ14749 295 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 PPA1Q15181 289 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 GPR157Q5UAW9 335 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 C1orf189Q5VU69 101 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 LIAT1Q6ZQX7 453 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 OR14L1PQ8NHC6 308 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 CLDND2Q8NHS1 167 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 NAT6Q93015 286 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 MSI2Q96DH6 328 aaKnown RBP10.19□□□□□ -0.78
CPSF3-202ENST00000460593 PGAM5Q96HS1 289 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 SNHG12Q9BXW3 62 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 ZNF665Q9H7R5 613 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 SERINC1Q9NRX5 453 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 GPR173Q9NS66 373 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 PLA2G3Q9NZ20 509 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 PTPRSQ13332 1948 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 CELSR3Q9NYQ7 3312 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 PROB1E7EW31 1015 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 TMEM50AO95807 157 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 IGKV3-11P04433 115 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 ERVS71-1P61550 626 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 GABREP78334 506 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 TNFRSF9Q07011 255 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 FOXF1Q12946 379 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 NSDHLQ15738 373 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 VSIRQ9H7M9 311 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 KIAA1456Q9P272 454 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 TP53TG5Q9Y2B4 290 aa10.19□□□□□ -0.78
CPSF3-202ENST00000460593 IGHV5-51A0A0C4DH38 117 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 A0A1W2PR80 420 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
CPSF3-202ENST00000460593 EFNA2O43921 213 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 HNRNPA2B1P22626 353 aaKnown RBP10.18□□□□□ -0.78
CPSF3-202ENST00000460593 SFTPDP35247 375 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 NOGQ13253 232 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 SMAD4Q13485 552 aaKnown RBP10.18□□□□□ -0.78
CPSF3-202ENST00000460593 CMTM1Q8IZ96 169 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 FGF14Q92915 247 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 C18orf12Q96KH6 178 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 CABLES2Q9BTV7 478 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 UCK1Q9HA47 277 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 A0A087WWC5 75 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 FAM230AA0A1W2PPH8 454 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 TMEM150CB9EJG8 249 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 CTSEP14091 401 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 ZNF25P17030 456 aaPredicted RBP10.18□□□□□ -0.78
CPSF3-202ENST00000460593 ALDH3B1P43353 468 aa10.18□□□□□ -0.78
CPSF3-202ENST00000460593 JOSD1Q15040 202 aaPredicted RBP10.18□□□□□ -0.78
CPSF3-202ENST00000460593 MYPOPQ86VE0 399 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms