RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 V9GYY9 64 aa3.18□□□□□ -1.9
CCDC50-203ENST00000460064 IGHV3-49A0A0A0MS15 119 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 A0A1W2PQL4 384 aaPredicted RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 E5RI56 91 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 K7EN84 100 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 PSPHP1O15172 72 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 SGCEO43556 437 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 GATCO43716 136 aaKnown RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 GATBO75879 557 aaKnown RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 PLEKHA8P1O95397 391 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 CYB5R3P00387 301 aaPredicted RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 ASS1P00966 412 aaKnown RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 SLC35G6P0C7Q6 338 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 PRLHRP49683 370 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 XKP51811 444 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 MTPNP58546 118 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 ARF6P62330 175 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 SLC35B1P78383 322 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 C2orf54Q08AI8 447 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 INCA1Q0VD86 236 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 MED21Q13503 144 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 OR4D1Q15615 310 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 STEAP4Q687X5 459 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 NEGR1Q7Z3B1 354 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 TAC4Q86UU9 113 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 GID4Q8IVV7 300 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 HS3ST5Q8IZT8 346 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 OR1L1Q8NH94 360 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 RNF133Q8WVZ7 376 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 DGCR14Q96DF8 476 aaKnown RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 Q96MT0 163 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 ZFP3Q96NJ6 502 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 UTP23Q9BRU9 249 aaKnown RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 DCUN1D5Q9BTE7 237 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 NUDT9Q9BW91 350 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 ARV1Q9H2C2 271 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 HEBP1Q9NRV9 189 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 TMEM100Q9NV29 134 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 PLEKHJ1Q9NW61 149 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 USE1Q9NZ43 259 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 SIGLEC7Q9Y286 467 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 SIGLEC9Q9Y336 463 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 ZNF608Q9ULD9 1512 aaPredicted RBP3.17□□□□□ -1.9
CCDC50-203ENST00000460064 FHAD1B1AJZ9 1412 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 ADGRL3Q9HAR2 1447 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 NCOA3Q9Y6Q9 1424 aa3.17□□□□□ -1.9
CCDC50-203ENST00000460064 AQRO60306 1485 aaKnown RBP eCLIP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 ROCK1Q13464 1354 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 IGLV2-18A0A075B6J9 118 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 IGLV3-12A0A075B6K2 115 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 FUOMA2VDF0 154 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 PRMT5O14744 637 aaPredicted RBP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 TRAPPC6AO75865 159 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 HMGN1P05114 100 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 RPS17P08708 135 aaKnown RBP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 PET100P0DJ07 73 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 CXCR1P25024 350 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 NKX2-5P52952 324 aaPredicted RBP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 C2orf80Q0P641 193 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 NDUFAF6Q330K2 333 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 TIMM23BQ5SRD1 257 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 CPTPQ5TA50 214 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 KDM4DQ6B0I6 523 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 SPOPLQ6IQ16 392 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 CYP4Z2PQ8N1L4 340 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 OSR2Q8N2R0 312 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 ZNF615Q8N8J6 731 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 ZNF738Q8NE65 137 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 CCDC112Q8NEF3 446 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 OR2Y1Q8NGV0 311 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 OR6N2Q8NGY6 317 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 PHF10Q8WUB8 498 aaKnown RBP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 RTN4IP1Q8WWV3 396 aaPredicted RBP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 TMEM234Q8WY98 164 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 CMTM5Q96DZ9 223 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 WDR34Q96EX3 536 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 CENPNQ96H22 339 aaPredicted RBP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 FAM19A4Q96LR4 140 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 PRAP1Q96NZ9 151 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 CHCHD7Q9BUK0 85 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 BCL2L14Q9BZR8 327 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 WIF1Q9Y5W5 379 aa3.16□□□□□ -1.9
CCDC50-203ENST00000460064 KIF26AQ9ULI4 1882 aaPredicted RBP3.16□□□□□ -1.9
CCDC50-203ENST00000460064 A0A1B0GTI1 187 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 SLC5A10A0PJK1 596 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 SMIM23A6NLE4 172 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 H7C2Y5 167 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 SCO1O75880 301 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 TNFAIP8O95379 198 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 PSMG1O95456 288 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 IFNA5P01569 189 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 CBR1P16152 277 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 HCCSP53701 268 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 TAS2R60P59551 318 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 LSM6P62312 80 aaKnown RBP3.15□□□□□ -1.91
CCDC50-203ENST00000460064 ZNF616Q08AN1 781 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 MAD2L1BPQ15013 274 aaPredicted RBP3.15□□□□□ -1.91
CCDC50-203ENST00000460064 ZNHIT3Q15649 155 aaPredicted RBP3.15□□□□□ -1.91
CCDC50-203ENST00000460064 PRSS8Q16651 343 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 DUPD1Q68J44 220 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms