RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 C1orf147Q96MC9 270 aaPredicted RBP10.63□□□□□ -0.71
COL18A1-206ENST00000459895 TMPRSS13Q9BYE2 586 aa10.63□□□□□ -0.71
COL18A1-206ENST00000459895 KCNK15Q9H427 330 aa10.63□□□□□ -0.71
COL18A1-206ENST00000459895 SLC25A10Q9UBX3 287 aaPredicted RBP10.63□□□□□ -0.71
COL18A1-206ENST00000459895 MRPS28Q9Y2Q9 187 aaKnown RBP10.63□□□□□ -0.71
COL18A1-206ENST00000459895 CUBNO60494 3623 aa10.63□□□□□ -0.71
COL18A1-206ENST00000459895 A0A1W2PP11 408 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 SIRPB1O00241 398 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 NDUFB3O43676 98 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 ENSAO43768 121 aaKnown RBP10.62□□□□□ -0.71
COL18A1-206ENST00000459895 ZNF737O75373 536 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 ARL6IP5O75915 188 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 SERPINA2P20848 420 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 PRDX2P32119 198 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 PTGFRP43088 359 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 MTNR1BP49286 362 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 FGF12P61328 243 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 COL10A1Q03692 680 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 RSU1Q15404 277 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 LRRC10Q5BKY1 277 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 FAM120AOSQ5T036 256 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 C22orf42Q6IC83 251 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 FIP1L1Q6UN15 594 aaKnown RBP10.62□□□□□ -0.71
COL18A1-206ENST00000459895 H1FXQ92522 213 aaKnown RBP10.62□□□□□ -0.71
COL18A1-206ENST00000459895 NR1H4Q96RI1 486 aaPredicted RBP10.62□□□□□ -0.71
COL18A1-206ENST00000459895 VCX3AQ9NNX9 186 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 TMEM160Q9NX00 188 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 IL36GQ9NZH8 169 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 ZNF581Q9P0T4 197 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 STUB1Q9UNE7 303 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 GSTK1Q9Y2Q3 226 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 INSIG2Q9Y5U4 225 aa10.62□□□□□ -0.71
COL18A1-206ENST00000459895 ZFHX3Q15911 3703 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 DSCAML1Q8TD84 2053 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 SONP18583 2426 aaKnown RBP10.61□□□□□ -0.71
COL18A1-206ENST00000459895 LOC105371242A0A075B767 164 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 PPIAL4CA0A0B4J2A2 164 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 TRDV1A0A1B0GX56 115 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 AVPP01185 164 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 NDUFB7P17568 137 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 SRMP19623 302 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 GADD45AP24522 165 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 CAPZA1P52907 286 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 RBM11P57052 281 aaKnown RBP10.61□□□□□ -0.71
COL18A1-206ENST00000459895 ZNF146Q15072 292 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 SLC22A6Q4U2R8 563 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 ELP2Q6IA86 826 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 GLIPR1L1Q6UWM5 242 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 ASCL4Q6XD76 172 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 C1orf229Q6ZS94 237 aaPredicted RBP10.61□□□□□ -0.71
COL18A1-206ENST00000459895 BTN2A1Q7KYR7 527 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 MED30Q96HR3 178 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 NUDT16L1Q9BRJ7 211 aaKnown RBP10.61□□□□□ -0.71
COL18A1-206ENST00000459895 CHST6Q9GZX3 395 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 SLITRK2Q9H156 845 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 OR51E2Q9H255 320 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 RHOFQ9HBH0 211 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 EXOSC4Q9NPD3 245 aaKnown RBP10.61□□□□□ -0.71
COL18A1-206ENST00000459895 OPN4Q9UHM6 478 aa10.61□□□□□ -0.71
COL18A1-206ENST00000459895 RPUSD1Q9UJJ7 312 aaKnown RBP10.61□□□□□ -0.71
COL18A1-206ENST00000459895 HIVEP2P31629 2446 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 SMIM30A4D0T7 59 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 J3QLI3 93 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 PSPNO60542 156 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 HTR3BO95264 441 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 OR2H2O95918 312 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 CD36P16671 472 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 GATA3P23771 443 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 MYL9P24844 172 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 OR3A1P47881 315 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 CAV3P56539 151 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 OR10A3P58181 314 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 FAHD2BQ6P2I3 314 aaPredicted RBP10.6□□□□□ -0.71
COL18A1-206ENST00000459895 C17orf107Q6ZR85 190 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 CDH26Q8IXH8 852 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 TBC1D15Q8TC07 691 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 RAB40AQ8WXH6 277 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 FAHD2AQ96GK7 314 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 CHCHD6Q9BRQ6 235 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 UQCC2Q9BRT2 126 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 DCTN5Q9BTE1 182 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 METTL9Q9H1A3 318 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 C19orf12Q9NSK7 152 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 TXNL4BQ9NX01 149 aaKnown RBP10.6□□□□□ -0.71
COL18A1-206ENST00000459895 ING4Q9UNL4 249 aa10.6□□□□□ -0.71
COL18A1-206ENST00000459895 AK6Q9Y3D8 172 aaKnown RBP10.6□□□□□ -0.71
COL18A1-206ENST00000459895 DOCK11Q5JSL3 2073 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 LOC100506127A0A0U1RQW1 187 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 HSPB6O14558 160 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 SLC22A1O15245 554 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 FSHBP01225 129 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 TK1P04183 234 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 ZNF44P15621 663 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 JUNBP17275 347 aaPredicted RBP10.59□□□□□ -0.71
COL18A1-206ENST00000459895 HNF1AP20823 631 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 GALP22466 123 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 GABRR1P24046 479 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 BMXP51813 675 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms