RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 ASCC1Q8N9N2 400 aaKnown RBP8.14□□□□□ -1.11
HDLBP-228ENST00000459788 CHST4Q8NCG5 386 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 OR5D14Q8NGL3 314 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 TRMT10AQ8TBZ6 339 aaKnown RBP8.14□□□□□ -1.11
HDLBP-228ENST00000459788 EMG1Q92979 244 aaKnown RBP8.14□□□□□ -1.11
HDLBP-228ENST00000459788 LGALS12Q96DT0 336 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 ADAT3Q96EY9 351 aaPredicted RBP8.14□□□□□ -1.11
HDLBP-228ENST00000459788 PELI1Q96FA3 418 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 OPALINQ96PE5 141 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 SSX3Q99909 188 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 COMMD4Q9H0A8 199 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 MMP27Q9H306 513 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 ELL3Q9HB65 397 aaPredicted RBP8.14□□□□□ -1.11
HDLBP-228ENST00000459788 S100A14Q9HCY8 104 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 TNFRSF19Q9NS68 423 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 PITPNC1Q9UKF7 332 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 UBE2J1Q9Y385 318 aaPredicted RBP8.14□□□□□ -1.11
HDLBP-228ENST00000459788 RPL36Q9Y3U8 105 aaKnown RBP8.14□□□□□ -1.11
HDLBP-228ENST00000459788 MINOS1-NBL1R4GNA1 71 aa8.14□□□□□ -1.11
HDLBP-228ENST00000459788 IGKV1-9A0A0C4DH69 117 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 LOC100130705A0A1B0GUX0 176 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 IRGMA1A4Y4 181 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 A6NIN4 97 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 ODF3BA8MYP8 253 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 H3BUX3 64 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 SH2D1BO14796 132 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 KDM4BO94953 1096 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 APOL3O95236 402 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 HAND1O96004 215 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 TFF1P04155 84 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 CSN2P05814 226 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 IGHV1-8P0DP01 117 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 NANOS3P60323 173 aaKnown RBP8.13□□□□□ -1.11
HDLBP-228ENST00000459788 ZNF273Q14593 569 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 CCDC58Q4VC31 144 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 OR52W1Q6IF63 320 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 SERPINA12Q8IW75 414 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 PARP16Q8N5Y8 322 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 OR4C13Q8NGP0 309 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 CORO2AQ92828 525 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 UBE2FQ969M7 185 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 SLAMF9Q96A28 289 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 FGGYQ96C11 551 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 ZNF714Q96N38 554 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 ALG8Q9BVK2 526 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 NPFFR1Q9GZQ6 430 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 NCOR1P1Q9H4R4 102 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 ZCCHC4Q9H5U6 513 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 HMG20AQ9NP66 347 aa8.13□□□□□ -1.11
HDLBP-228ENST00000459788 TMEM82A0PJX8 343 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 F8VVB4 439 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 F8VWA3 439 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 J3QLW9 94 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 OCM2P0CE71 109 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 OCMP0CE72 109 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ZNF19P17023 458 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 DCKP27707 260 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 GABRA5P31644 462 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 CEBPDP49716 269 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-228ENST00000459788 GBX2P52951 348 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-228ENST00000459788 PAX5Q02548 391 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ZSCAN26Q16670 478 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ZIK1Q3SY52 487 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ELP2Q6IA86 826 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ASPHD2Q6ICH7 369 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 RDH10Q8IZV5 341 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 PNKDQ8N490 385 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ZNF676Q8N7Q3 588 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ZNF555Q8NEP9 628 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 PXT1Q8NFP0 134 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 OR4M1Q8NGD0 313 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 OR13C3Q8NGS6 347 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 RPS4Y2Q8TD47 263 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 CREB3L1Q96BA8 519 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 C4orf36Q96KX1 117 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ZNF649Q9BS31 505 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 GAL3ST2Q9H3Q3 398 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 TCF7L1Q9HCS4 588 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 FGF20Q9NP95 211 aaPredicted RBP8.12□□□□□ -1.11
HDLBP-228ENST00000459788 FAM118AQ9NWS6 357 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 ERVK13-1Q9NX77 482 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 TAS2R3Q9NYW6 316 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 SESN1Q9Y6P5 492 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 PLXNB1O43157 2135 aa8.12□□□□□ -1.11
HDLBP-228ENST00000459788 A0A1W2PRD5 423 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 A0A1W2PRF3 423 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 A0A1W2PRM7 423 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 SULT1B1O43704 296 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 CCL3L1P16619 93 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 BCL3P20749 454 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 KCNJ3P48549 501 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 MTNR1BP49286 362 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 EFNB2P52799 333 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 P2RX3P56373 397 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 EDDM3BP56851 147 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 IL18R1Q13478 541 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 HERPUD1Q15011 391 aa8.11□□□□□ -1.11
HDLBP-228ENST00000459788 GRK1Q15835 563 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms