RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 RPL31P62899 125 aaKnown RBP13.32□□□□□ -0.28
CD28-203ENST00000458610 GUCA2AQ02747 115 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 COL10A1Q03692 680 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 GPR50Q13585 617 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 ZNF146Q15072 292 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 GDPD3Q7L5L3 318 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 FAM185AQ8N0U4 392 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 FGFRL1Q8N441 504 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 ZFP41Q8N8Y5 198 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 ASCC1Q8N9N2 400 aaKnown RBP13.32□□□□□ -0.28
CD28-203ENST00000458610 PXT1Q8NFP0 134 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 SPACA5Q96QH8 159 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 TBX15Q96SF7 602 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 S100A13Q99584 98 aa13.32□□□□□ -0.28
CD28-203ENST00000458610 METTL8Q9H825 291 aaKnown RBP13.32□□□□□ -0.28
CD28-203ENST00000458610 RBFOX1Q9NWB1 397 aaKnown RBP13.32□□□□□ -0.28
CD28-203ENST00000458610 ANGPTL7O43827 346 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 CRHBPP24387 322 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 EEF1B2P24534 225 aaKnown RBP13.31□□□□□ -0.28
CD28-203ENST00000458610 TGFBR2P37173 567 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 NPBWR2P48146 333 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 MTNR1BP49286 362 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 MED22Q15528 200 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 NCR3LG1Q68D85 454 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 OR5D18Q8NGL1 313 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 LHX4Q969G2 390 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 PGLYRP3Q96LB9 341 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 CCDC90BQ9GZT6 254 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 EXOSC4Q9NPD3 245 aaKnown RBP13.31□□□□□ -0.28
CD28-203ENST00000458610 PAK1IP1Q9NWT1 392 aaPredicted RBP13.31□□□□□ -0.28
CD28-203ENST00000458610 FOXJ3Q9UPW0 622 aa13.31□□□□□ -0.28
CD28-203ENST00000458610 IGHV3OR16-10A0A075B7F0 116 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 IGHV1-69DA0A0B4J2H0 117 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 CENPVL3A0A0U1RRI6 287 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 PNMA8CA0A1B0GUJ8 204 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 FUOMA2VDF0 154 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 IGHV1-69P01742 117 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 SFTPBP07988 381 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 ZNF93P35789 620 aaPredicted RBP13.3□□□□□ -0.28
CD28-203ENST00000458610 CEBPDP49716 269 aaPredicted RBP13.3□□□□□ -0.28
CD28-203ENST00000458610 RPS11P62280 158 aaKnown RBP eCLIP13.3□□□□□ -0.28
CD28-203ENST00000458610 IRF3Q14653 427 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 RSU1Q15404 277 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 METAP1DQ6UB28 335 aaPredicted RBP13.3□□□□□ -0.28
CD28-203ENST00000458610 PRSS48Q7RTY5 328 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 VMO1Q7Z5L0 202 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 CDH26Q8IXH8 852 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 OR8H2Q8N162 312 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 CHST4Q8NCG5 386 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 OR52N4Q8NGI2 321 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 TNFAIP8L1Q8WVP5 186 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 ZNF184Q99676 751 aaPredicted RBP13.3□□□□□ -0.28
CD28-203ENST00000458610 MDFIQ99750 246 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 ZMAT3Q9HA38 289 aaKnown RBP13.3□□□□□ -0.28
CD28-203ENST00000458610 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
CD28-203ENST00000458610 ISYNA1Q9NPH2 558 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 GSTK1Q9Y2Q3 226 aa13.3□□□□□ -0.28
CD28-203ENST00000458610 RRP15Q9Y3B9 282 aaKnown RBP13.3□□□□□ -0.28
CD28-203ENST00000458610 IGKV1-12A0A0C4DH73 117 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 MEGF11A6BM72 1044 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 ZNF780AO75290 641 aaPredicted RBP13.29□□□□□ -0.28
CD28-203ENST00000458610 ZNF737O75373 536 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 VENTXO95231 258 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 IGKV1D-12P01611 117 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 FSTP19883 344 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 GABRR1P24046 479 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 PRTN3P24158 256 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 PTGFRP43088 359 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 ZP1P60852 638 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 MEF2CQ06413 473 aaPredicted RBP13.29□□□□□ -0.28
CD28-203ENST00000458610 BAMBIQ13145 260 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 DDI2Q5TDH0 399 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 TMEM200BQ69YZ2 307 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 ELP2Q6IA86 826 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 ASCL4Q6XD76 172 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 SIGLECL1Q8N7X8 197 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 OR51A2Q8NGJ7 313 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 OR13C5Q8NGS8 318 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 SPATA3Q8NHX4 192 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 OR14A2Q96R54 314 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 FAM192AQ9GZU8 254 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 METTL9Q9H1A3 318 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 UNKLQ9H9P5 680 aaKnown RBP13.29□□□□□ -0.28
CD28-203ENST00000458610 NOX4Q9NPH5 578 aa13.29□□□□□ -0.28
CD28-203ENST00000458610 TRBV5-7A0A0A0MS05 114 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 hADV38S2A0JD32 116 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 GABRPO00591 440 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 MGST3O14880 152 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 DEGS1O15121 323 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 DENRO43583 198 aaKnown RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 MRPS14O60783 128 aaKnown RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 RGS9O75916 674 aaPredicted RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 CSTBP04080 98 aaKnown RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 IGFBP3P17936 291 aaPredicted RBP13.28□□□□□ -0.28
CD28-203ENST00000458610 LMO1P25800 156 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 DUSP1P28562 367 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 EDDM3BP56851 147 aa13.28□□□□□ -0.28
CD28-203ENST00000458610 DOC2BQ14184 412 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms