RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 FAM90A15PP0C7V4 464 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 FAM90A13PP0C7W8 464 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 FAM90A14PP0C7W9 464 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 FAM90A24PP0C7X0 464 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 CPT2P23786 658 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 ART1P52961 327 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 BTG1P62324 171 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 FAM189A2Q15884 450 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 MICBQ29980 383 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 FIP1L1Q6UN15 594 aaKnown RBP13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 ZNF525Q8N782 197 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 PERPQ96FX8 193 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 URM1Q9BTM9 101 aaKnown RBP13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 MIXL1Q9H2W2 232 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 DNAJB11Q9UBS4 358 aa13.9□□□□□ -0.18
CCDC90B-202ENST00000455220 CSMD1Q96PZ7 3565 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 A0A0A6YYD4 124 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 TRAV38-1A0A0B4J264 116 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 OR2AT4A6NND4 320 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 GEMIN2O14893 280 aaKnown RBP13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 ZNF205O95201 554 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 IGHV2-70P01814 119 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 PSG2P11465 335 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 GIFP27352 417 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 ZMYND11Q15326 602 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 STUMQ69YW2 141 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 SFRP4Q6FHJ7 346 aaPredicted RBP13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 LAX1Q8IWV1 398 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 CMTM4Q8IZR5 234 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 C19orf18Q8NEA5 215 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 NICN1Q9BSH3 213 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 IFT22Q9H7X7 185 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 ZNF222Q9UK12 451 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 WIPI2Q9Y4P8 454 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 PEX16Q9Y5Y5 336 aa13.89□□□□□ -0.19
CCDC90B-202ENST00000455220 VPS13CQ709C8 3753 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 IGKV1D-17A0A075B6S4 117 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 IGHV3OR15-7A0A075B7D8 119 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 METTL21EPA6NDL7 271 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 FOXI3A8MTJ6 420 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 RGS5O15539 181 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 EIF4EP06730 217 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 CSF3P09919 207 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 PDLIM4P50479 330 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 SNU13P55769 128 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 TAF9Q16594 264 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 Q6P435 159 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 DNM1P46Q6ZS02 220 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 PEG10Q86TG7 708 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 LRRC28Q86X40 367 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 ANGPTL6Q8NI99 470 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 TIMD4Q96H15 378 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 WDFY2Q96P53 400 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 TMEM165Q9HC07 324 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 A0A0A6YYH2 397 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 A6NJ64 397 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 RFPL4AA6NLU0 287 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 RFPL4AL1F8VTS6 287 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 RAB27BO00194 218 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 TNFRSF13BO14836 293 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 CHRM2P08172 466 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 ELK1P19419 428 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 DUSP1P28562 367 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 MDH2P40926 338 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 ATPAF1Q5TC12 328 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 SIGIRRQ6IA17 410 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 OR56B1Q8NGI3 324 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 OR6Q1Q8NGQ2 317 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 RAB1CQ92928 201 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 GAL3ST1Q99999 423 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 NUDT16L1Q9BRJ7 211 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 ATG5Q9H1Y0 275 aa13.88□□□□□ -0.19
CCDC90B-202ENST00000455220 PDZD2O15018 2839 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 NDUFS8O00217 210 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 PPIHO43447 177 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 SCGNO76038 276 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 OR7C1O76099 320 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 HAND1O96004 215 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 AMY2BP19961 511 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 GABRR1P24046 479 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 LMO1P25800 156 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 PRDX2P32119 198 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 GPR6P46095 362 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 PITPNBP48739 271 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 VEGFCP49767 419 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 KCNJ8Q15842 424 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 MOGAT2Q3SYC2 334 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 RAB12Q6IQ22 244 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 LINC00299Q6ZSB3 139 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 CD177Q8N6Q3 437 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 DEFB108BQ8NET1 73 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 OR5T2Q8NGG2 359 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 DNTTIP1Q9H147 329 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 ZNF581Q9P0T4 197 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 RCC2Q9P258 522 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 OR14J1Q9UGF5 321 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 GLS2Q9UI32 602 aa13.87□□□□□ -0.19
CCDC90B-202ENST00000455220 ADAM30Q9UKF2 790 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms