RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 GMNNO75496 209 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 CD34P28906 385 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 GRK1Q15835 563 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 HLA-DRB5Q30154 266 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 LCNL1Q6ZST4 164 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 OR5M8Q8NGP6 311 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 ZNF596Q8TC21 504 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 CDRT15Q96T59 188 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 NUFIP1Q9UHK0 495 aaKnown RBP13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 MAGEL2Q9UJ55 1249 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 SMAD5-AS1Q9Y6J3 95 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 V9GYS6 101 aa13.49□□□□□ -0.25
UBE2D4-209ENST00000454428 SERPINE3A8MV23 424 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 SRSF10O75494 262 aaKnown RBP13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 RPLP1P05386 114 aaKnown RBP13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 HSD17B1P14061 328 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 H2AFXP16104 143 aaPredicted RBP13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 ARHGDIBP52566 201 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 HEPN1Q6WQI6 88 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 COMMD1Q8N668 190 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 BBS1Q8NFJ9 593 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 OR14K1Q8NGZ2 314 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 SLAMF9Q96A28 289 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 CEP19Q96LK0 163 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 NSMCE2Q96MF7 247 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 CITED4Q96RK1 184 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 NIPSNAP1Q9BPW8 284 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 CADM1Q9BY67 442 aaKnown RBP13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 LAMP5Q9UJQ1 280 aa13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 UBE2J1Q9Y385 318 aaPredicted RBP13.48□□□□□ -0.25
UBE2D4-209ENST00000454428 A0A1B0GTI1 187 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 HAND1O96004 215 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 IGHG2P01859 326 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 SLC2A5P22732 501 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 CDK2P24941 298 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 PEX2P28328 305 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 MAGEA2P43356 314 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 OR3A1P47881 315 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 KIR2DS1Q14954 304 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 MICAQ29983 383 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 DEGS2Q6QHC5 323 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 Q6ZSR3 168 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 OVCH2Q7RTZ1 564 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 STPG2Q8N412 459 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 OR8U1Q8NH10 309 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 TRMT10AQ8TBZ6 339 aaKnown RBP13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 SEBOXQ9HB31 216 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 U3KQV3 271 aa13.47□□□□□ -0.25
UBE2D4-209ENST00000454428 PRODHO43272 600 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 INMTO95050 263 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 FAM106CPP0CH98 169 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 GABRR1P24046 479 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 ERP29P30040 261 aaKnown RBP13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 P2RX3P56373 397 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 ROM1Q03395 351 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 ZNF91Q05481 1191 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 FHL3Q13643 280 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 OR52W1Q6IF63 320 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 CD300LDQ6UXZ3 194 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 TRAPPC6BQ86SZ2 158 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 THNSL2Q86YJ6 484 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 NKX1-2Q9UD57 310 aaPredicted RBP13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 COPS3Q9UNS2 423 aa13.46□□□□□ -0.25
UBE2D4-209ENST00000454428 A0A087X0M5 115 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 A0A1B0GX30 115 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 FAM230AA0A1W2PPH8 454 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 OOSP1A8MZH6 123 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 PRR23D1E9PI22 279 aaPredicted RBP13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 MGST3O14880 152 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 PRR23D2P0DMB1 279 aaPredicted RBP13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 DUSP1P28562 367 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 CEACAM3P40198 252 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 ESRRGP62508 458 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 SLC35B1P78383 322 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 ZNF260Q3ZCT1 412 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 MEPCEQ7L2J0 689 aaKnown RBP13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 CPOQ8IVL8 374 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 RNF152Q8N8N0 203 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 OR56B4Q8NH76 319 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 TEX47Q8TBZ9 253 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 TTTY10Q9BZA0 68 aa13.45□□□□□ -0.26
UBE2D4-209ENST00000454428 FGF16O43320 207 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 CCDC22O60826 627 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 MNDAP41218 407 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 CDX1P47902 265 aaPredicted RBP13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 NPBWR2P48146 333 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 DIAPH2-AS1Q14236 149 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 UBE2V2Q15819 145 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 TEX38Q6PEX7 206 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 SLC35E3Q7Z769 313 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 ZNF679Q8IYX0 411 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 CORO2AQ92828 525 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 MROQ9BYG7 248 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 YIPF3Q9GZM5 350 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 GAL3ST2Q9H3Q3 398 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 EDA2RQ9HAV5 297 aa13.44□□□□□ -0.26
UBE2D4-209ENST00000454428 PCLOQ9Y6V0 5065 aa13.43□□□□□ -0.26
UBE2D4-209ENST00000454428 A0A1W2PPI3 338 aa13.43□□□□□ -0.26
UBE2D4-209ENST00000454428 ZNF254O75437 659 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms