RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 CHEK1O14757 476 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 RAB5AP20339 215 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 EWSR1Q01844 656 aaKnown RBP eCLIP6.83□□□□□ -1.32
RIF1-206ENST00000453091 MRPS24Q96EL2 167 aaKnown RBP6.83□□□□□ -1.32
RIF1-206ENST00000453091 CTDSP1Q9GZU7 261 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 C7orf66A4D0T2 115 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 ICAM2P13598 275 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 OR3A1P47881 315 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 SULT1A1P50225 295 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 RGS7BPQ6MZT1 257 aaPredicted RBP6.83□□□□□ -1.32
RIF1-206ENST00000453091 ZADH2Q8N4Q0 377 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 SLC26A10Q8NG04 563 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CMTM2Q8TAZ6 248 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 FBLIM1Q8WUP2 373 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 BLNKQ8WV28 456 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 OR2D2Q9H210 308 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 TNFRSF19Q9NS68 423 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CXorf65A6NEN9 183 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CNIH1O95406 144 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 ARHGEF39Q8N4T4 335 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 GPBAR1Q8TDU6 330 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 GHRLQ9UBU3 117 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 PIGBOS1A0A0B4J2F0 54 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 LYZL6O75951 148 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 APELAP0DMC3 54 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 ENDOGQ14249 297 aaKnown RBP6.83□□□□□ -1.32
RIF1-206ENST00000453091 ATRAIDQ6UW56 229 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 ZNF596Q8TC21 504 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 SLC35E1Q96K37 410 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 LIN7CQ9NUP9 197 aaKnown RBP6.83□□□□□ -1.32
RIF1-206ENST00000453091 FUT9Q9Y231 359 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 NHSL1Q5SYE7 1610 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 DHRS3O75911 302 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CRYBA2P53672 197 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 LDLRAD3Q86YD5 345 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 LHFPL5Q8TAF8 219 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 ZNF251Q9BRH9 671 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 IL17BQ9UHF5 180 aa6.83□□□□□ -1.32
RIF1-206ENST00000453091 CLDN34H7C241 214 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 AP4M1O00189 453 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 PNPP00491 289 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 ETV3LQ6ZN32 361 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 SLC25A42Q86VD7 318 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 ASB13Q8WXK3 278 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 H3BQ15 152 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 PTBP3O95758 552 aaKnown RBP6.82□□□□□ -1.32
RIF1-206ENST00000453091 NGFP01138 241 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 THY1P04216 161 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 TBPP20226 339 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 THBS3P49746 956 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 RAB35Q15286 201 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 FAM209BQ5JX69 171 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 LAMTOR1Q6IAA8 161 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 OR10G4Q8NGN3 311 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 OR10G9Q8NGN4 311 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 OR10G7Q8NGN6 311 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
RIF1-206ENST00000453091 S1PR3Q99500 378 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 ICAM5Q9UMF0 924 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 A0A1W2PQF6 199 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 C20orf202A1L168 122 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 CSN3P07498 182 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 CT45A6P0DMU7 189 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 CT45A5P0DMU8 189 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 CT45A7P0DMV0 189 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 KIR2DL1P43626 348 aaPredicted RBP6.82□□□□□ -1.32
RIF1-206ENST00000453091 FHITP49789 147 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 RAG2P55895 527 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 TIGITQ495A1 244 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 CT45A1Q5HYN5 189 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 C9orf40Q8IXQ3 194 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 SPEM1Q8N4L4 309 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 C11orf42Q8N5U0 333 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 CT45A3Q8NHU0 189 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 P4HTMQ9NXG6 502 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 NAT8BQ9UHF3 227 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 RECKO95980 971 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 NXPH1P58417 271 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 DMWDQ09019 674 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 MPPED2Q15777 294 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 SHISA5Q8N114 240 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 TPRX1Q8N7U7 411 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 TMEM178AQ8NBL3 297 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 TGIF2-C20orf24A0A0A6YYL0 155 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 SPAARA0A1B0GVQ0 90 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 TTRP02766 147 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 MEOX1P50221 254 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 HNRNPA3P51991 378 aaKnown RBP6.82□□□□□ -1.32
RIF1-206ENST00000453091 PPP1CBP62140 327 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
RIF1-206ENST00000453091 TMEM241Q24JQ0 296 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 ZNF573Q86YE8 665 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 OR10AD1Q8NGE0 317 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 OR10C1Q96KK4 312 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 MS4A10Q96PG2 267 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 ZNF385AQ96PM9 386 aaKnown RBP6.82□□□□□ -1.32
RIF1-206ENST00000453091 GPR27Q9NS67 375 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 RCC2Q9P258 522 aaKnown RBP6.82□□□□□ -1.32
RIF1-206ENST00000453091 ANKRD36CQ5JPF3 1778 aa6.82□□□□□ -1.32
RIF1-206ENST00000453091 NKX6-3A6NJ46 265 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms