RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ASPHD2Q6ICH7 369 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 FDX2Q6P4F2 183 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 OR4C13Q8NGP0 309 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 OR13C3Q8NGS6 347 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 RNF166Q96A37 237 aaPredicted RBP10.47□□□□□ -0.73
CHD3-206ENST00000452447 SPSB1Q96BD6 273 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 C4orf36Q96KX1 117 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 Q96MT0 163 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 ZNF714Q96N38 554 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 OPALINQ96PE5 141 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 C9orf16Q9BUW7 83 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 VCX3BQ9H321 246 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 RBFOX1Q9NWB1 397 aaKnown RBP10.47□□□□□ -0.73
CHD3-206ENST00000452447 FBLN5Q9UBX5 448 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 EXOGQ9Y2C4 368 aaKnown RBP10.47□□□□□ -0.73
CHD3-206ENST00000452447 IGKV1-9A0A0C4DH69 117 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 TRBV2A0A0J9YWF9 115 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 KCNAB3O43448 404 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 IGHA1P01876 353 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 RBP4P02753 201 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 PRKACAP17612 351 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 BCL3P20749 454 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 DUSP1P28562 367 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 NPBWR2P48146 333 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 DLX6P56179 175 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 DEFA6Q01524 100 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 MEF2CQ06413 473 aaPredicted RBP10.46□□□□□ -0.74
CHD3-206ENST00000452447 GRK1Q15835 563 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 LHFPL4Q7Z7J7 247 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 LHFPL3Q86UP9 236 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 ZNF676Q8N7Q3 588 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 DTX3Q8N9I9 347 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 PPP1R35Q8TAP8 253 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 LGALS12Q96DT0 336 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 PELI1Q96FA3 418 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 MBOAT4Q96T53 435 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 ALG8Q9BVK2 526 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 VCXQ9H320 206 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 SEBOXQ9HB31 216 aaPredicted RBP10.46□□□□□ -0.74
CHD3-206ENST00000452447 NEK6Q9HC98 313 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 AASSQ9UDR5 926 aa10.46□□□□□ -0.74
CHD3-206ENST00000452447 TBL2Q9Y4P3 447 aaKnown RBP10.46□□□□□ -0.74
CHD3-206ENST00000452447 TMEM82A0PJX8 343 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 E9PQ18 207 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 FADS2O95864 444 aaKnown RBP10.45□□□□□ -0.74
CHD3-206ENST00000452447 IGHV1-8P0DP01 117 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
CHD3-206ENST00000452447 KIR2DS4P43632 304 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 SNU13P55769 128 aaKnown RBP10.45□□□□□ -0.74
CHD3-206ENST00000452447 ZNF91Q05481 1191 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 PDZK1IP1Q13113 114 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 DYNC1I2Q13409 638 aaKnown RBP10.45□□□□□ -0.74
CHD3-206ENST00000452447 ALKBH1Q13686 389 aaKnown RBP10.45□□□□□ -0.74
CHD3-206ENST00000452447 GALEQ14376 348 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 ZNF146Q15072 292 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 RCN1Q15293 331 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 SPIN3Q5JUX0 258 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 C11orf88Q6PI97 169 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 OR51A4Q8NGJ6 313 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 OR2T6Q8NHC8 308 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 FOXRED1Q96CU9 486 aaPredicted RBP10.45□□□□□ -0.74
CHD3-206ENST00000452447 NPFFR1Q9GZQ6 430 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 CHST6Q9GZX3 395 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 RANBP3Q9H6Z4 567 aaPredicted RBP10.45□□□□□ -0.74
CHD3-206ENST00000452447 ABCB10Q9NRK6 738 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 IL36RNQ9UBH0 155 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 PCDHGB5Q9Y5G0 923 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 LINC00312Q9Y6C7 94 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 NOTCH3Q9UM47 2321 aa10.45□□□□□ -0.74
CHD3-206ENST00000452447 FAM90A8PA6NJQ4 464 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 OR4C45A6NMZ5 311 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 SH2D1BO14796 132 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 MGST3O14880 152 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 BAG2O95816 211 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 RPSAP08865 295 aaKnown RBP10.44□□□□□ -0.74
CHD3-206ENST00000452447 CALCBP10092 127 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 DBTP11182 482 aaKnown RBP10.44□□□□□ -0.74
CHD3-206ENST00000452447 FAM189A2Q15884 450 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 SSX2Q16385 188 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 C2orf68Q2NKX9 166 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 PLA1AQ53H76 456 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 ZBTB49Q6ZSB9 765 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 Q6ZTK2 550 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 TRAPPC6BQ86SZ2 158 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 TPRX1Q8N7U7 411 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 OR11H6Q8NGC7 330 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 OR52N4Q8NGI2 321 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 OR13C9Q8NGT0 318 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 OR10AC1Q8NH08 325 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 RFT1Q96AA3 541 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 MALSU1Q96EH3 234 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 HMG20AQ9NP66 347 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 AMBNQ9NP70 447 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 C8orf4Q9NR00 106 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 MYRFQ9Y2G1 1151 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 GSTK1Q9Y2Q3 226 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 SIGLEC9Q9Y336 463 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 TGP01266 2768 aa10.44□□□□□ -0.74
CHD3-206ENST00000452447 PRKDCP78527 4128 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms