RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 OR2T6Q8NHC8 308 aa13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 NRG4Q8WWG1 115 aa13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 PELI1Q96FA3 418 aa13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 NRIP2Q9BQI9 281 aa13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 JAM3Q9BX67 310 aa13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 VCX3BQ9H321 246 aa13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 PLEKHA1Q9HB21 404 aa13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 FGF20Q9NP95 211 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP3-204ENST00000449879 NOTCH3Q9UM47 2321 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 LOC107986453A0A1B0GWG9 222 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 SYT7O43581 403 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 TK1P04183 234 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 DCKP27707 260 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 MRPL28Q13084 256 aaKnown RBP13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ZNF273Q14593 569 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 AANATQ16613 207 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CRIP3Q6Q6R5 217 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 LHFPL4Q7Z7J7 247 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 TRMT10AQ8TBZ6 339 aaKnown RBP13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 TFAP2CQ92754 450 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 RNF166Q96A37 237 aaPredicted RBP13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 NKX3-1Q99801 234 aaPredicted RBP13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 RAB18Q9NP72 206 aa13.45□□□□□ -0.26
RAB11FIP3-204ENST00000449879 FAM230AA0A1W2PPH8 454 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 MEX3AA1L020 520 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 H3BSH0 61 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 VSIG10L2P0DP72 767 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 RAB13P51153 203 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CCR9P51686 369 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 AQP4P55087 323 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 NANOS3P60323 173 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 PLA1AQ53H76 456 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 TMEM244Q5VVB8 128 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 C11orf88Q6PI97 169 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CALHM1Q8IU99 346 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 KLHDC1Q8N7A1 406 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 PIFOQ8TCI5 191 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 HAVCR2Q8TDQ0 301 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ZNF649Q9BS31 505 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 NPFFR1Q9GZQ6 430 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ISG20L2Q9H9L3 353 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 FRRS1LQ9P0K9 344 aa13.44□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CHST1O43916 411 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 INMTO95050 263 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ISG15P05161 165 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 LIMS3P0CW19 117 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 LIMS4P0CW20 117 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 MYL12AP19105 171 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 MPZP25189 248 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 COL10A1Q03692 680 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 MED21Q13503 144 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ALKBH1Q13686 389 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ASCC1Q8N9N2 400 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 FBLIM1Q8WUP2 373 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 C10orf35Q96D05 121 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 RANBP3Q9H6Z4 567 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 HES4Q9HCC6 221 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 DIMT1Q9UNQ2 313 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 SLC7A11Q9UPY5 501 aa13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 EXOSC1Q9Y3B2 195 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-204ENST00000449879 PRKDCP78527 4128 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 EFCAB10A6NFE3 127 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 K7N7A8 449 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ARG1P05089 322 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 GBX2P52951 348 aaPredicted RBP13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 EDDM3BP56851 147 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ERVK11-1P61568 191 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 IL24Q13007 206 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 RIPK1Q13546 671 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 TMPRSS11AQ6ZMR5 421 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 RDH10Q8IZV5 341 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 DYNAPQ8N1N2 210 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CFHR4Q92496 578 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 TMEM80Q96HE8 168 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 PKIBQ9C010 78 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CNOT2Q9NZN8 540 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 PLXNB1O43157 2135 aa13.42□□□□□ -0.26
RAB11FIP3-204ENST00000449879 MEGF11A6BM72 1044 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 FAM90A8PA6NJQ4 464 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 OR4C45A6NMZ5 311 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 C17orf98A8MV24 154 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 F8VVB4 439 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 F8VWA3 439 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 G3V4G9 280 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 GATBO75879 557 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ATP6V1G2O95670 118 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 OPN1MWP04001 364 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CHRM2P08172 466 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 RPSAP08865 295 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 CCDC159P0C7I6 412 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 OPN1MW2P0DN77 364 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 OPN1MW3P0DN78 364 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 ETV1P50549 477 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 DLX6P56179 175 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 UBE2V2Q15819 145 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 FAM189A2Q15884 450 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 SSX2Q16385 188 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 LIAT1Q6ZQX7 453 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 GDPD3Q7L5L3 318 aa13.41□□□□□ -0.26
RAB11FIP3-204ENST00000449879 LYG1Q8N1E2 194 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms