RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 GRK1Q15835 563 aa22.76■■□□□ 1.23
CBX4-202ENST00000448310 PRSS22Q9GZN4 317 aa22.76■■□□□ 1.23
CBX4-202ENST00000448310 GNG8Q9UK08 70 aa22.76■■□□□ 1.23
CBX4-202ENST00000448310 F2RL2O00254 374 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 PSPNO60542 156 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 BCL3P20749 454 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 PEX2P28328 305 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 BLCAPP62952 87 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 ZNF85Q03923 595 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 ZNF91Q05481 1191 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 SLC34A1Q06495 639 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 TMEM95Q3KNT9 176 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 EME1Q96AY2 570 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 ADAT3Q96EY9 351 aaPredicted RBP22.75■■□□□ 1.23
CBX4-202ENST00000448310 CITED2Q99967 270 aaPredicted RBP22.75■■□□□ 1.23
CBX4-202ENST00000448310 LINC00312Q9Y6C7 94 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 SESN1Q9Y6P5 492 aa22.75■■□□□ 1.23
CBX4-202ENST00000448310 IGHV2-26A0A0B4J1V2 119 aa22.74■■□□□ 1.23
CBX4-202ENST00000448310 OXLD1Q5BKU9 147 aa22.74■■□□□ 1.23
CBX4-202ENST00000448310 ARSJQ5FYB0 599 aaPredicted RBP22.74■■□□□ 1.23
CBX4-202ENST00000448310 CCDC54Q8NEL0 328 aa22.74■■□□□ 1.23
CBX4-202ENST00000448310 OR4S1Q8NGB4 309 aa22.74■■□□□ 1.23
CBX4-202ENST00000448310 NDNFQ8TB73 568 aa22.74■■□□□ 1.23
CBX4-202ENST00000448310 WIPF2Q8TF74 440 aaPredicted RBP22.74■■□□□ 1.23
CBX4-202ENST00000448310 RNF166Q96A37 237 aaPredicted RBP22.74■■□□□ 1.23
CBX4-202ENST00000448310 IGKV1-9A0A0C4DH69 117 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 ADARB2-AS1A8MUL3 147 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 PEX14O75381 377 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 MMP23AO75900 390 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 UBCP0CG48 685 aaKnown RBP22.73■■□□□ 1.23
CBX4-202ENST00000448310 RBP2P50120 134 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 DYNLT3P51808 116 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 ATP1B3P54709 279 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 ISL1P61371 349 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 BNIP1Q12981 228 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 FAM220AQ7Z4H9 259 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 FAM58AQ8N1B3 248 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 OR8J1Q8NGP2 316 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 R3HDM4Q96D70 268 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 GABARAPL3Q9BY60 117 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 WNT10AQ9GZT5 417 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 TMEM133Q9H2Q1 129 aa22.73■■□□□ 1.23
CBX4-202ENST00000448310 DNAH3Q8TD57 4116 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 PRKACAP17612 351 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 EMX1Q04741 257 aaPredicted RBP22.72■■□□□ 1.23
CBX4-202ENST00000448310 MINOS1Q5TGZ0 78 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 C1orf146Q5VVC0 180 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 Q6ZPA2 131 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 NDUFA11Q86Y39 141 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 Q8IYB0 196 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 ENTHD1Q8IYW4 607 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 PP6455Q8WZ26 134 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 C10orf35Q96D05 121 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 CLEC7AQ9BXN2 247 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 OAZ3Q9UMX2 235 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 MINOS1-NBL1R4GNA1 71 aa22.72■■□□□ 1.23
CBX4-202ENST00000448310 TRBV2A0A0J9YWF9 115 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 ENTPD6O75354 484 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 OR3A1P47881 315 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 MTCP1P56278 107 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 FBLN7Q53RD9 439 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 BAIAP2L2Q6UXY1 529 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 TRAPPC6BQ86SZ2 158 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 DNAAF1Q8NEP3 725 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 RFT1Q96AA3 541 aa22.71■■□□□ 1.23
CBX4-202ENST00000448310 SEBOXQ9HB31 216 aaPredicted RBP22.71■■□□□ 1.23
CBX4-202ENST00000448310 SAC3D1A6NKF1 404 aa22.7■■□□□ 1.22
CBX4-202ENST00000448310 SIRPB1O00241 398 aa22.7■■□□□ 1.22
CBX4-202ENST00000448310 CYB5AP00167 134 aa22.7■■□□□ 1.22
CBX4-202ENST00000448310 FCGR1AP12314 374 aa22.7■■□□□ 1.22
CBX4-202ENST00000448310 ATF1P18846 271 aa22.7■■□□□ 1.22
CBX4-202ENST00000448310 AZGP1P25311 298 aaKnown RBP22.7■■□□□ 1.22
CBX4-202ENST00000448310 VDAC2P45880 294 aaPredicted RBP22.7■■□□□ 1.22
CBX4-202ENST00000448310 OR2G2Q8NGZ5 317 aa22.7■■□□□ 1.22
CBX4-202ENST00000448310 FGGYQ96C11 551 aa22.7■■□□□ 1.22
CBX4-202ENST00000448310 MGST3O14880 152 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 XPNPEP2O43895 674 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 P2RX3P56373 397 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 TMED1Q13445 227 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 ZNF146Q15072 292 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 PRAMEF5Q5TYX0 476 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 RNF144BQ7Z419 303 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 OR4F17Q8NGA8 305 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 OR4P4Q8NGL7 312 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 RFKQ969G6 155 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 OR4F4Q96R69 305 aa22.69■■□□□ 1.22
CBX4-202ENST00000448310 ZNF20P17024 532 aa22.68■■□□□ 1.22
CBX4-202ENST00000448310 CD24P25063 80 aa22.68■■□□□ 1.22
CBX4-202ENST00000448310 HTR1DP28221 377 aa22.68■■□□□ 1.22
CBX4-202ENST00000448310 NANOS3P60323 173 aaKnown RBP22.68■■□□□ 1.22
CBX4-202ENST00000448310 TMEM244Q5VVB8 128 aa22.68■■□□□ 1.22
CBX4-202ENST00000448310 OSBPL10Q9BXB5 764 aa22.68■■□□□ 1.22
CBX4-202ENST00000448310 FRRS1LQ9P0K9 344 aa22.68■■□□□ 1.22
CBX4-202ENST00000448310 GSTK1Q9Y2Q3 226 aa22.68■■□□□ 1.22
CBX4-202ENST00000448310 IGKV1-12A0A0C4DH73 117 aa22.67■■□□□ 1.22
CBX4-202ENST00000448310 A0A1W2PRX2 142 aa22.67■■□□□ 1.22
CBX4-202ENST00000448310 FAM172BPA6NC97 362 aa22.67■■□□□ 1.22
CBX4-202ENST00000448310 FAM90A22PA8MWA6 464 aa22.67■■□□□ 1.22
CBX4-202ENST00000448310 IGKV1D-12P01611 117 aa22.67■■□□□ 1.22
CBX4-202ENST00000448310 PRKACBP22694 351 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms