RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SERINC1Q9NRX5 453 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 DECR2Q9NUI1 292 aa16.81■□□□□ 0.28
HMGA1-205ENST00000447654 TYMSP04818 313 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 PVRP15151 417 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 DUSP1P28562 367 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 RPS27P42677 84 aaKnown RBP16.8■□□□□ 0.28
HMGA1-205ENST00000447654 PTCRAQ6ISU1 281 aaPredicted RBP16.8■□□□□ 0.28
HMGA1-205ENST00000447654 PRSS41Q7RTY9 318 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 ZFP62Q8NB50 900 aaPredicted RBP16.8■□□□□ 0.28
HMGA1-205ENST00000447654 KCNG3Q8TAE7 436 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 ZCCHC14Q8WYQ9 949 aaKnown RBP16.8■□□□□ 0.28
HMGA1-205ENST00000447654 PLK3Q9H4B4 646 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 MMP25Q9NPA2 562 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 EHFQ9NZC4 300 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 LRP12Q9Y561 859 aa16.8■□□□□ 0.28
HMGA1-205ENST00000447654 TRAV39A0A0B4J263 110 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 RRP8O43159 456 aaKnown RBP16.79■□□□□ 0.28
HMGA1-205ENST00000447654 IGHV4-34P06331 123 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 TDGF1P13385 188 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 CHRNB4P30926 498 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 PPP1CAP62136 330 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 ARL6IP1Q15041 203 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 DEFB134Q4QY38 66 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF761Q86XN6 746 aaPredicted RBP16.79■□□□□ 0.28
HMGA1-205ENST00000447654 GCNT2Q8N0V5 402 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 TM4SF19Q96DZ7 209 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 SLC35E1Q96K37 410 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 C10orf142B7Z368 130 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 HSBP1L1C9JCN9 74 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 KNG1P01042 644 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 EWSR1Q01844 656 aaKnown RBP eCLIP16.79■□□□□ 0.28
HMGA1-205ENST00000447654 RUNX2Q13950 521 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 TMEM183BQ1AE95 376 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF880Q6PDB4 577 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 CISD2Q8N5K1 135 aaKnown RBP16.79■□□□□ 0.28
HMGA1-205ENST00000447654 NT5CQ8TCD5 201 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 TBX15Q96SF7 602 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 RBKSQ9H477 322 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 G6PC2Q9NQR9 355 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 SPTBP11277 2137 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 TRIOBPQ9H2D6 2365 aa16.79■□□□□ 0.28
HMGA1-205ENST00000447654 KIF26BQ2KJY2 2108 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 HCRTR1O43613 425 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 UBE2NP61088 152 aaKnown RBP16.78■□□□□ 0.28
HMGA1-205ENST00000447654 CSNK2A1P68400 391 aaPredicted RBP16.78■□□□□ 0.28
HMGA1-205ENST00000447654 IL24Q13007 206 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 GNMTQ14749 295 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 ATP6V1FQ16864 119 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 PLAC9Q5JTB6 97 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 DEGS2Q6QHC5 323 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 CSNK2A3Q8NEV1 391 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 OR52N5Q8NH56 324 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 BOD1Q96IK1 185 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 TP53RKQ96S44 253 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 AGMATQ9BSE5 352 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 PILRAQ9UKJ1 303 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 HSF4Q9ULV5 492 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 MED19A0JLT2 244 aaPredicted RBP16.78■□□□□ 0.28
HMGA1-205ENST00000447654 H7C1C5 153 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 OR6A2O95222 327 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 AHSA1O95433 338 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 RAC2P15153 192 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 PTTG1IPP53801 180 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 MTCP1P56278 107 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 RPS15AP62244 130 aaKnown RBP16.78■□□□□ 0.28
HMGA1-205ENST00000447654 LCN6P62502 163 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 RPL18Q07020 188 aaKnown RBP16.78■□□□□ 0.28
HMGA1-205ENST00000447654 RTL6Q6ICC9 239 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 RNF44Q7L0R7 432 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 H1FOOQ8IZA3 346 aaPredicted RBP16.78■□□□□ 0.28
HMGA1-205ENST00000447654 OR51G1Q8NGK1 321 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 BTF3L4Q96K17 158 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 TECTBQ96PL2 329 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 OR5B12Q96R08 314 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 PCGF1Q9BSM1 259 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 PLSCR2Q9NRY7 297 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 LAMP3Q9UQV4 416 aa16.78■□□□□ 0.28
HMGA1-205ENST00000447654 TNFRSF10CO14798 259 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 SEMA4FO95754 770 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 HLA-DQA2P01906 255 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 SMIM10L1P0DMW3 83 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 RAB11AP62491 216 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 PRICKLE4Q2TBC4 344 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 COX15Q7KZN9 410 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 C10orf53Q8N6V4 93 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 MOB3AQ96BX8 217 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 SMIM10Q96HG1 83 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 ABHD6Q9BV23 337 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 ZNF576Q9H609 170 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 FOXJ2Q9P0K8 574 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 B3GAT1Q9P2W7 334 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 MMP17Q9ULZ9 603 aa16.77■□□□□ 0.28
HMGA1-205ENST00000447654 A0A0A6YYD4 124 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF705FA8MVS1 300 aaPredicted RBP16.77■□□□□ 0.27
HMGA1-205ENST00000447654 TNFSF14O43557 240 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 CTSBP07858 339 aa16.77■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF705DP0CH99 300 aaPredicted RBP16.77■□□□□ 0.27
HMGA1-205ENST00000447654 ZNF705BP0CI00 300 aaPredicted RBP16.77■□□□□ 0.27
HMGA1-205ENST00000447654 CNN1P51911 297 aaKnown RBP16.77■□□□□ 0.27
HMGA1-205ENST00000447654 SNU13P55769 128 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms