RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 IGKV1D-33P01593 117 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 IGKV1-33P01594 117 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MT-ND1P03886 318 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 CD74P04233 296 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 PRDX2P32119 198 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 KIR2DS2P43631 304 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 NPBWR2P48146 333 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 FAM3AP98173 230 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MEF2CQ06413 473 aaPredicted RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 KLF5Q13887 457 aaPredicted RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 GALEQ14376 348 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 HES1Q14469 280 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 RFX4Q33E94 735 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 SLC18B1Q6NT16 456 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 CORO6Q6QEF8 472 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 TIFABQ6ZNK6 161 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 ZNF621Q6ZSS3 439 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 ZNF367Q7RTV3 350 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 OR9G4Q8NGQ1 327 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 UBALD1Q8TB05 177 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MAL2Q969L2 176 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 ZBTB9Q96C00 473 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 ZNF799Q96GE5 643 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 C17orf77Q96MU5 243 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 PAFAH2Q99487 392 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MCHR1Q99705 422 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 C11orf68Q9H3H3 251 aaKnown RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 PCDHB16Q9NRJ7 776 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 RASL12Q9NYN1 266 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MRM2Q9UI43 246 aaKnown RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 SIGLEC7Q9Y286 467 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 LINC00312Q9Y6C7 94 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 G3V318 75 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 ZNF737O75373 536 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 SERPINA1P01009 418 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MYL2P10916 166 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 AQP1P29972 269 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 GPR4P46093 362 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 CCT5P48643 541 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 TPTEP56180 551 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 LRRC74AQ0VAA2 488 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 CALCOCO2Q13137 446 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MAD2L1Q13257 205 aaPredicted RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 FHL1Q13642 323 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MEP1BQ16820 701 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 KRT71Q3SY84 523 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 CD300EQ496F6 205 aaPredicted RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 ENTPD8Q5MY95 495 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 MINDY2Q8NBR6 621 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 PFN4Q8NHR9 129 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 HPSE2Q8WWQ2 592 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 OR5P3Q8WZ94 311 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 NAPGQ99747 312 aaPredicted RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 MICU1Q9BPX6 476 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 RNF126Q9BV68 326 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 RTL8AQ9BWD3 113 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 C11orf54Q9H0W9 315 aaPredicted RBP2.38□□□□□ -2.03
PMS1-215ENST00000447232 RAD21L1Q9H4I0 556 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 ZNF286AQ9HBT8 521 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 SLC7A7Q9UM01 511 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 RHBDD3Q9Y3P4 386 aa2.38□□□□□ -2.03
PMS1-215ENST00000447232 A0A087X0M5 115 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 hCG_38984A0A1B0GV85 526 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 A0A1B0GX30 115 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 PRSS37A4D1T9 235 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 TRAPPC13A5PLN9 417 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 TMEM247A6NEH6 219 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 FAM183AA6NL82 134 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 CPSF4LA6NMK7 179 aaKnown RBP2.37□□□□□ -2.03
PMS1-215ENST00000447232 E9PBE3 544 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 SOX15O60248 233 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 MPZL2O60487 215 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 KHDRBS3O75525 346 aaKnown RBP2.37□□□□□ -2.03
PMS1-215ENST00000447232 AMBPP02760 352 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 CHRNGP07510 517 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 RPS7P62081 194 aaKnown RBP2.37□□□□□ -2.03
PMS1-215ENST00000447232 DYRK1AQ13627 763 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 APOFQ13790 326 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 KLHL12Q53G59 568 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 MESTQ5EB52 335 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 UTF1Q5T230 341 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 OR52W1Q6IF63 320 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 PGM2L1Q6PCE3 622 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 SLC16A9Q7RTY1 509 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 OR6V1Q8N148 313 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 OR6T1Q8NGN1 323 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 CHAC2Q8WUX2 184 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 VPS33AQ96AX1 596 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 OR51I2Q9H344 312 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 WDR55Q9H6Y2 383 aaPredicted RBP2.37□□□□□ -2.03
PMS1-215ENST00000447232 TPT1P8Q9HAU6 139 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 ZC4H2Q9NQZ6 224 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 POLR1DQ9Y2S0 133 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 hADV38S2A0JD32 116 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 ANXA2P2A6NMY6 339 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 NCBP2LA6PVI3 153 aaKnown RBP2.37□□□□□ -2.03
PMS1-215ENST00000447232 UBE2CO00762 179 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 XRCC2O43543 280 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 SLC16A7O60669 478 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms