RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 C11orf88Q6PI97 169 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 CCBE1Q6UXH8 406 aaPredicted RBP12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 RNF144BQ7Z419 303 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ENTHD1Q8IYW4 607 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 FAM58AQ8N1B3 248 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 OR51A4Q8NGJ6 313 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 OR4C13Q8NGP0 309 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 OR13D1Q8NGV5 346 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 CFHR4Q92496 578 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 SPSB1Q96BD6 273 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 LGALS12Q96DT0 336 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 MALSU1Q96EH3 234 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 PELI1Q96FA3 418 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ZNF714Q96N38 554 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 AASSQ9UDR5 926 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ORC6Q9Y5N6 252 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
SPTLC1P1-201ENST00000447199 IGKV1-12A0A0C4DH73 117 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 DAPL1A0PJW8 107 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 IGKV1D-12P01611 117 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 MT-ND2P03891 347 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ARG1P05089 322 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 PRKACBP22694 351 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 DUSP1P28562 367 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 OR3A1P47881 315 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 POU3F4P49335 361 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 MTCP1P56278 107 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 PDZK1IP1Q13113 114 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 EDDM3AQ14507 147 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 HERPUD1Q15011 391 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 C2orf68Q2NKX9 166 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 LHFPL2Q6ZUX7 228 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 CBR4Q8N4T8 237 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ACBD7Q8N6N7 88 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 TPRX1Q8N7U7 411 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 OR4S1Q8NGB4 309 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 FOXRED1Q96CU9 486 aaPredicted RBP12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ZNF649Q9BS31 505 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 CHST6Q9GZX3 395 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 TCF19Q9Y242 345 aa12.8□□□□□ -0.36
SPTLC1P1-201ENST00000447199 hADV38S2A0JD32 116 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 A6NDX4 124 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 J3QLW9 94 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 HTR1AP08908 422 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ZNF19P17023 458 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 PEX2P28328 305 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 RAB13P51153 203 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 GALEQ14376 348 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 GRK1Q15835 563 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 Q8N2B8 174 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 C4orf36Q96KX1 117 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 OPALINQ96PE5 141 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 NPFFR1Q9GZQ6 430 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ZNF702PQ9H963 129 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 HMG20AQ9NP66 347 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 DSCAML1Q8TD84 2053 aa12.79□□□□□ -0.36
SPTLC1P1-201ENST00000447199 MGST3O14880 152 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 KDM4BO94953 1096 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 CALCBP10092 127 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 DBTP11182 482 aaKnown RBP12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ZNF20P17024 532 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 PRKACAP17612 351 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 GABRR1P24046 479 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 DYNLT3P51808 116 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ACTA2P62736 377 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ACTG2P63267 376 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 ALKBH1Q13686 389 aaKnown RBP12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 PLA1AQ53H76 456 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 HIST2H2BDQ6DRA6 164 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 KLHDC1Q8N7A1 406 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 OR2T6Q8NHC8 308 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 RHOXF1Q8NHV9 184 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 WIPF2Q8TF74 440 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 SERTAD4Q9NUC0 356 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 MYRFQ9Y2G1 1151 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 GMPPBQ9Y5P6 360 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
SPTLC1P1-201ENST00000447199 IGHV2-26A0A0B4J1V2 119 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 SNTNA6NMZ2 147 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 MMP23AO75900 390 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 ALX3O95076 343 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 CYB5AP00167 134 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 CSF1P09603 554 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 LMO1P25800 156 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 P2RX3P56373 397 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 FAM189A2Q15884 450 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 SSX2Q16385 188 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 MINOS1Q5TGZ0 78 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 Q6ZTK2 550 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 LHFPL3Q86UP9 236 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 SYS1Q8N2H4 156 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 OR13C3Q8NGS6 347 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 OR13C9Q8NGT0 318 aa12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 FAM110DQ8TAY7 271 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1P1-201ENST00000447199 RPS4Y2Q8TD47 263 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms