RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 WDR31Q8NA23 367 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 SEC22AQ96IW7 307 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 PLSCR4Q9NRQ2 329 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 LHX6Q9UPM6 363 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 ACACAQ13085 2346 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 M0R233 179 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 AGFG2O95081 481 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 CLEC18BQ6UXF7 455 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 ZNF488Q96MN9 340 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 SCGB3A2Q96PL1 93 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 ZNF442Q9H7R0 627 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 C12orf4Q9NQ89 552 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 PRR13Q9NZ81 148 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 OR5B21A6NL26 309 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 RFPL4AA6NLU0 287 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 C3orf80F5H4A9 247 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 RFPL4AL1F8VTS6 287 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 ZNF205O95201 554 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 CFDP00746 253 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 OR5H8P0DN80 308 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 RPS2P15880 293 aaKnown RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 MRPL49Q13405 166 aaKnown RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 SLC9A3R2Q15599 337 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 NHLRC3Q5JS37 347 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 MKXQ8IYA7 352 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 STARD4Q96DR4 205 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 POM121Q96HA1 1249 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 BOD1Q96IK1 185 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 OPN3Q9H1Y3 402 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 CLEC4MQ9H2X3 399 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A10PA6NDY2 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 MBD3L4A6NDZ8 208 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A18PA6NE21 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 MBD3L3A6NE82 208 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A16PA6NEW6 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A20PA6NIJ5 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 MBD3L5A6NJ08 208 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A8PA6NJQ4 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A7PA6NKC0 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A22PA8MWA6 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A12PA8MX19 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A5PA8MXJ8 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A23PA8MXZ1 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 TRAPPC2LH3BP13 241 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 SFT2D2O95562 160 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 CGAP01215 116 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 IGKV3-15P01624 115 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A15PP0C7V4 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A13PP0C7W8 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A14PP0C7W9 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM90A24PP0C7X0 464 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 GNG3P63215 75 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 SURF2Q15527 256 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 SLC22A25Q6T423 547 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 ZNF610Q8N9Z0 462 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 C1orf162Q8NEQ5 155 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 MBD3L2Q8NHZ7 208 aaPredicted RBP14.92□□□□□ -0.02
SMC6-206ENST00000446852 PDCD10Q9BUL8 212 aa14.92□□□□□ -0.02
SMC6-206ENST00000446852 FAM25EA8MYX2 175 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 PMELP40967 661 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 EXOSC2Q13868 293 aaKnown RBP14.91□□□□□ -0.02
SMC6-206ENST00000446852 ALKBH6Q3KRA9 238 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 PLEKHN1Q494U1 663 aaPredicted RBP14.91□□□□□ -0.02
SMC6-206ENST00000446852 CXorf67Q86X51 503 aaPredicted RBP14.91□□□□□ -0.02
SMC6-206ENST00000446852 SLC25A40Q8TBP6 338 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 EXTL1Q92935 676 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 MICU1Q9BPX6 476 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 NECAP2Q9NVZ3 263 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 MAP1BP46821 2468 aaKnown RBP14.91□□□□□ -0.02
SMC6-206ENST00000446852 RP1L1Q8IWN7 2480 aaPredicted RBP14.91□□□□□ -0.02
SMC6-206ENST00000446852 PIEZO2Q9H5I5 2752 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 HOXB1P14653 301 aaPredicted RBP14.91□□□□□ -0.02
SMC6-206ENST00000446852 CBR1P16152 277 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 S100A1P23297 94 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 UCP2P55851 309 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 ANKRD55Q3KP44 614 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 ZNF573Q86YE8 665 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 DECR2Q9NUI1 292 aa14.91□□□□□ -0.02
SMC6-206ENST00000446852 RCC2Q9P258 522 aaKnown RBP14.91□□□□□ -0.02
SMC6-206ENST00000446852 WDR1O75083 606 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 PGAM2P15259 253 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 DUSP1P28562 367 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 CALCRP30988 508 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 HOXC12P31275 282 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 EIF2S3P41091 472 aaKnown RBP14.9□□□□□ -0.02
SMC6-206ENST00000446852 GMFBP60983 142 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 FOXC1Q12948 553 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 TMEM211Q6ICI0 200 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 WDR86Q86TI4 376 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 RPRMLQ8N4K4 120 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 PPP1R1CQ8WVI7 109 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 OR51I2Q9H344 312 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 TMEM165Q9HC07 324 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 PROCRQ9UNN8 238 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 FAM215AQ9Y5M1 114 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 RHBDL1O75783 438 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 KNG1P01042 644 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 PRKACAP17612 351 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 S100A11P31949 105 aa14.9□□□□□ -0.02
SMC6-206ENST00000446852 PTGER4P35408 488 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms