RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CPOQ8IVL8 374 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 ZNF695Q8IW36 515 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 KLHL30-AS1Q8NEE0 82 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 BBS1Q8NFJ9 593 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 CEP19Q96LK0 163 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 NOL4LQ96MY1 436 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-208ENST00000443046 CDRT15Q96T59 188 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 GAR1Q9NY12 217 aaKnown RBP11.35□□□□□ -0.59
HMGN1-208ENST00000443046 SCOCQ9UIL1 159 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 U3KQV3 271 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 SORL1Q92673 2214 aa11.35□□□□□ -0.59
HMGN1-208ENST00000443046 IGKV1-27A0A075B6S5 117 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 BUB1B-PAK6H3BSN5 160 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 SASH3O75995 380 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 HAND1O96004 215 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 GRK1Q15835 563 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 SNAPC1Q16533 368 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 HLA-DRB5Q30154 266 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 ZNF829Q3KNS6 432 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-208ENST00000443046 TPTE2P1Q5T6R2 138 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 ELMOD2Q8IZ81 293 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 PGAM4Q8N0Y7 254 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 COMMD1Q8N668 190 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 CORO2AQ92828 525 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 CREB3L1Q96BA8 519 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 FEVQ99581 238 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 CHST6Q9GZX3 395 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGN1-208ENST00000443046 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 SAMHD1Q9Y3Z3 626 aaKnown RBP11.34□□□□□ -0.59
HMGN1-208ENST00000443046 HSPE1-MOB4S4R3N1 261 aa11.34□□□□□ -0.59
HMGN1-208ENST00000443046 A0A087X0M5 115 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 A0A1B0GX30 115 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 TCRBV5S2A0A599 114 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 A6NIN4 97 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 NUDT19A8MXV4 375 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 OOSP1A8MZH6 123 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 H3BN98 237 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 CCL24O00175 119 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 MGST3O14880 152 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 CCL1P22362 96 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 CDK2P24941 298 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 GDNFP39905 211 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 OR3A1P47881 315 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 P2RX3P56373 397 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 CDK5Q00535 292 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 ZNF91Q05481 1191 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 DOC2BQ14184 412 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 GINS1Q14691 196 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 SPATS1Q496A3 300 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 PRAMEF5Q5TYX0 476 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 OR2T5Q6IEZ7 315 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 Q8NFD4 153 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 OR10G2Q8NGC3 310 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 OR2T29Q8NH02 315 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 ASB17Q8WXJ9 295 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 CADM1Q9BY67 442 aaKnown RBP11.33□□□□□ -0.6
HMGN1-208ENST00000443046 MAGIXQ9H6Y5 334 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 REEP1Q9H902 201 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 ZNF286AQ9HBT8 521 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 IL36RNQ9UBH0 155 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 COPS3Q9UNS2 423 aa11.33□□□□□ -0.6
HMGN1-208ENST00000443046 IGHG2P01859 326 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 HMGN1P05114 100 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 FAM106CPP0CH98 169 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 ATP6V1B2P21281 511 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 GABRR1P24046 479 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 CEACAM3P40198 252 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 RIDAP52758 137 aaKnown RBP11.32□□□□□ -0.6
HMGN1-208ENST00000443046 ESRRGP62508 458 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 ZNF146Q15072 292 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 UTF1Q5T230 341 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 C9orf66Q5T8R8 295 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 SLX4IPQ5VYV7 408 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 CCDC144NLQ6NUI1 221 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 ENTHD1Q8IYW4 607 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 TRMT10AQ8TBZ6 339 aaKnown RBP11.32□□□□□ -0.6
HMGN1-208ENST00000443046 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 RCHY1Q96PM5 261 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 GAL3ST2Q9H3Q3 398 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 DCLRE1BQ9H816 532 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 MOB1AQ9H8S9 216 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 TAS2R3Q9NYW6 316 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 ACTR3BQ9P1U1 418 aa11.32□□□□□ -0.6
HMGN1-208ENST00000443046 FAM230AA0A1W2PPH8 454 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 FAM172BPA6NC97 362 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 CCDC182A6NF36 153 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 FGF16O43320 207 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 LYL1P12980 280 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 MNDAP41218 407 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 ECI1P42126 302 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 APOFQ13790 326 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 GK3PQ14409 553 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 KIR2DS1Q14954 304 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 CYP2R1Q6VVX0 501 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 SLC25A26Q70HW3 274 aa11.31□□□□□ -0.6
HMGN1-208ENST00000443046 TRAPPC6BQ86SZ2 158 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms