RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MMP9P14780 707 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 KCNE1P15382 129 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 GPX2P18283 190 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PGCP20142 388 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZBTB25P24278 435 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 GDF5P43026 501 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 GLIPR1P48060 266 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SOX2P48431 317 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CNN1P51911 297 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 RPS18P62269 152 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZNF266Q14584 549 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 P2RY6Q15077 328 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MST1LQ2TV78 715 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 C12orf73Q69YU5 71 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 AMMECR1LQ6DCA0 310 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OPN5Q6U736 354 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TMEM207Q6UWW9 146 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 BTNL8Q6UX41 500 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 LINC00696Q6ZRV3 163 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MOB1BQ7L9L4 216 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 NR2C2APQ86WQ0 139 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZNF584Q8IVC4 421 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ARIH2OSQ8N7S6 290 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SIGLECL1Q8N7X8 197 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZSCAN4Q8NAM6 433 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 CYB561A3Q8NBI2 242 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR4K2Q8NGD2 314 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR4P4Q8NGL7 312 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 UBTD2Q8WUN7 234 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SLC25A43Q8WUT9 341 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 CTHRC1Q96CG8 243 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 C4orf36Q96KX1 117 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 HSPB9Q9BQS6 159 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SLC5A7Q9GZV3 580 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 P2RY12Q9H244 342 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ISG20L2Q9H9L3 353 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 SLC17A5Q9NRA2 495 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MARCH4Q9P2E8 410 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 VPS29Q9UBQ0 182 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PILRBQ9UKJ0 227 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FBXW2Q9UKT8 454 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MMP17Q9ULZ9 603 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MSRB2Q9Y3D2 182 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 RHBDD3Q9Y3P4 386 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MRPS18BQ9Y676 258 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 SELENOKQ9Y6D0 94 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 V9GY05 133 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 THADAQ6YHU6 1953 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MED12Q93074 2177 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MED13Q9UHV7 2174 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CMYA5Q8N3K9 4069 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 COL4A3Q01955 1670 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SHROOM3Q8TF72 1996 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MAP1LC3B2A6NCE7 125 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TLCD2A6NGC4 264 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FIGNL2A6NMB9 653 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 DIRC3C9JPN6 131 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 H3BSH0 61 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 K7ESF4 209 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CDIPTO14735 213 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 GPR137BO60478 399 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FAM157CP0CG43 387 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ESDP10768 282 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CCL4P13236 92 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 EPORP19235 508 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CD33P20138 364 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PRPH2P23942 346 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 AK4P27144 223 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 DUSP1P28562 367 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FCGR2CP31995 323 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 BUD31P41223 144 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 LCN6P62502 163 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 LTBQ06643 244 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MYBPHQ13203 477 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 WDR25Q64LD2 544 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZNF776Q68DI1 518 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 RPL22L1Q6P5R6 122 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 KCNIP4Q6PIL6 250 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PET117Q6UWS5 81 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 RPTNQ6XPR3 784 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SLC36A1Q7Z2H8 476 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 LYG2Q86SG7 212 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TMEM150AQ86TG1 271 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ATG4DQ86TL0 474 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 C4orf19Q8IY42 314 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TMEM123Q8N131 208 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZNF843Q8N446 348 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CHST4Q8NCG5 386 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR2T33Q8NG76 320 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR5AU1Q8NGC0 362 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR4K14Q8NGD5 310 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR4L1Q8NH43 312 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR4S2Q8NH73 311 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 C11orf40Q8WZ69 217 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 NKD1Q969G9 470 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 C5orf30Q96GV9 206 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 HARBI1Q96MB7 349 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CITED2Q99967 270 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 TPPP3Q9BW30 176 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MAP1LC3BQ9GZQ8 125 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms