RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PRR22Q8IZ63 422 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 SLC38A9Q8NBW4 561 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 OR51T1Q8NGJ9 327 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 OR51E1Q8TCB6 317 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 STT3BQ8TCJ2 826 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 DAZLQ92904 295 aaKnown RBP10.4□□□□□ -0.74
LTBR-203ENST00000441074 TSLPQ969D9 159 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 MVB12AQ96EY5 273 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 RCC1LQ96I51 464 aaKnown RBP10.4□□□□□ -0.74
LTBR-203ENST00000441074 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 ZNF2Q9BSG1 426 aaPredicted RBP10.4□□□□□ -0.74
LTBR-203ENST00000441074 DECR2Q9NUI1 292 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 KIAA1456Q9P272 454 aa10.4□□□□□ -0.74
LTBR-203ENST00000441074 RIF1Q5UIP0 2472 aaKnown RBP10.4□□□□□ -0.75
LTBR-203ENST00000441074 LAMA5O15230 3695 aa10.4□□□□□ -0.75
LTBR-203ENST00000441074 NSG1A0A0A6YYJ2 146 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 NPIPB13A6NJU9 1138 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 C9J4A7 227 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 NPIPB4C9JG80 1138 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 DVL1O14640 695 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 TIAF1O95411 115 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 HSPB1P04792 205 aaKnown RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 OR5H8P0DN80 308 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 HLA-DOBP13765 273 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 KLK2P20151 261 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 FGF7P21781 194 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 DAP3P51398 398 aaKnown RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 CCL7P80098 99 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 NHLH2Q02577 135 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 JOSD1Q15040 202 aaPredicted RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 TRIM61Q5EBN2 209 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 ZNF385CQ66K41 422 aaPredicted RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 DPPA2Q7Z7J5 298 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 PLXDC1Q8IUK5 500 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 OR14K1Q8NGZ2 314 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 ASB10Q8WXI3 467 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 NIPSNAP3BQ9BS92 247 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 NDUFAF3Q9BU61 184 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 PECRQ9BY49 303 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 MRPL37Q9BZE1 423 aaKnown RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 ARRDC1-AS1Q9H2J1 176 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 FGF21Q9NSA1 209 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 B4DEV8 164 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 XRCC2O43543 280 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 CA11O75493 328 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 HPNP05981 417 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 HCKP08631 526 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 ZP4Q12836 540 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 PPA1Q15181 289 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 USF2Q15853 346 aaPredicted RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 SUMF1Q8NBK3 374 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 OR6X1Q8NH79 312 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 FAM210BQ96KR6 192 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 SOX7Q9BT81 388 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 SUCNR1Q9BXA5 334 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 FOXD3Q9UJU5 478 aaPredicted RBP10.39□□□□□ -0.75
LTBR-203ENST00000441074 PADI1Q9ULC6 663 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 CFAP47Q6ZTR5 3102 aa10.39□□□□□ -0.75
LTBR-203ENST00000441074 IGKV1D-43A0A0B4J1Z2 117 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 ZNF878C9JN71 531 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 SCAF4O95104 1147 aaKnown RBP10.38□□□□□ -0.75
LTBR-203ENST00000441074 DIRAS3O95661 229 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 BLVRBP30043 206 aaPredicted RBP10.38□□□□□ -0.75
LTBR-203ENST00000441074 TMEM187Q14656 261 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 ICAM4Q14773 271 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 OR8G1Q15617 311 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 TMEM176BQ3YBM2 270 aaPredicted RBP10.38□□□□□ -0.75
LTBR-203ENST00000441074 ZNF506Q5JVG8 444 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 SP5Q6BEB4 398 aaPredicted RBP10.38□□□□□ -0.75
LTBR-203ENST00000441074 RTL6Q6ICC9 239 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 OR10S1Q8NGN2 331 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 OR2G3Q8NGZ4 309 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 RNASEH2CQ8TDP1 164 aaKnown RBP10.38□□□□□ -0.75
LTBR-203ENST00000441074 GPER1Q99527 375 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 MOB1AQ9H8S9 216 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 PITPNC1Q9UKF7 332 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 OTOGLQ3ZCN5 2332 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 CDC14CA4D256 554 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 C17orf51A8MQB3 221 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 NPIPA5E9PKD4 350 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 PHOX2AO14813 284 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 SFTPCP11686 197 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 DUSP1P28562 367 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 NBL1P41271 181 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 CEBPGP53567 150 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 LRTM2Q8N967 370 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 GPR119Q8TDV5 335 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 SSC4DQ8WTU2 575 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 TMEM234Q8WY98 164 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 C11orf40Q8WZ69 217 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 WWTR1Q9GZV5 400 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 CRLF2Q9HC73 371 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 COPS7AQ9UBW8 275 aa10.38□□□□□ -0.75
LTBR-203ENST00000441074 NPIPA1Q9UND3 350 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms