RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PBOV1Q9GZY1 135 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM185BQ9H7F4 350 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SRD5A3Q9H8P0 318 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 BEX1Q9HBH7 125 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM165Q9HC07 324 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 GPN1Q9HCN4 374 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 DNAJC4Q9NNZ3 241 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 FAM206AQ9NX38 181 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC39A1Q9NY26 324 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 C1RLQ9NZP8 487 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 B3GAT1Q9P2W7 334 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 KLK11Q9UBX7 282 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 MTFP1Q9UDX5 166 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 CYB5R1Q9UHQ9 305 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SCP2D1Q9UJQ7 156 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 DKKL1Q9UK85 242 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 RAB22AQ9UL26 194 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 MGAT4AQ9UM21 535 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 FLVCR2Q9UPI3 526 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 POLR1DQ9Y2S0 133 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 AMDHD2Q9Y303 409 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 NPTNQ9Y639 398 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 MRPS18BQ9Y676 258 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 CHCHD2Q9Y6H1 151 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 THADAQ6YHU6 1953 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 NUP210LQ5VU65 1888 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A1B0GTI1 187 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A1B0GUH1 482 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 LOC107986453A0A1B0GWG9 222 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 LOC390937A0A1W2PQ73 354 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GJE1A6NN92 205 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF878C9JN71 531 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 NPIPA2E9PIF3 369 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 NPIPA3F8WFD2 350 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 DVL1O14640 695 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 TXNL1O43396 289 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 SYT7O43581 403 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 TRAF3IP2O43734 574 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CREBL2O60519 120 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 KLF7O75840 302 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 SCGNO76038 276 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CLDN14O95500 239 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 RAB3DO95716 219 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 IGHV2-70P01814 119 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 TTRP02766 147 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ALDOBP05062 364 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GP1BAP07359 652 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ERCC1P07992 297 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ACSM4P0C7M7 580 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF883P0CG24 379 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CCL3P10147 92 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GTF2F2P13984 249 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 LIFP15018 202 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CPN1P15169 458 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CXCL3P19876 107 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 RAB3AP20336 220 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ACP1P24666 158 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 SFTPDP35247 375 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 PTGER4P35408 488 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CDKN1AP38936 164 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GUCA1AP43080 201 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CSNK1A1P48729 337 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 VEGFCP49767 419 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 PRKXP51817 358 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CLDN15P56746 228 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CLDN6P56747 220 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CLDN17P56750 224 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 TAS2R19P59542 299 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CD81P60033 236 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ACTBP60709 375 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 LSM6P62312 80 aaKnown RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 SNRPD2P62316 118 aaKnown RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GRB2P62993 217 aaKnown RBP2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ACTG1P63261 375 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 H3F3AP84243 136 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GALK2Q01415 458 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ARL16Q0P5N6 197 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 SGCAQ16586 387 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 HIST3H3Q16695 136 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 LINC00303Q3SY05 128 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GLYATL3Q5SZD4 288 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 DCAF12Q5T6F0 453 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ASPHD2Q6ICH7 369 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ETFRF1Q6IPR1 90 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CORO6Q6QEF8 472 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 PGAP1Q75T13 922 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 BIVMQ86UB2 503 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 LYPD6Q86Y78 171 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 WDFY1Q8IWB7 410 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 CDH26Q8IXH8 852 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 GABRG1Q8N1C3 465 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 C9orf62Q8N4C0 152 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC22A24Q8N4F4 322 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM156Q8N614 296 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 DEFB123Q8N688 67 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF283Q8N7M2 679 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM229BQ8NBD8 167 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 BEST4Q8NFU0 473 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 DMBX1Q8NFW5 382 aa2.93□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR51A2Q8NGJ7 313 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms