RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 FAM90A24PP0C7X0 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 HIST1H1DP16402 221 aaKnown RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CCNOP22674 350 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 PRKACBP22694 351 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CCKARP32238 428 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MAGEB1P43366 347 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ASCL1P50553 236 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CLDN17P56750 224 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF121P58317 390 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 SPOCK1Q08629 439 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 UNC119Q13432 240 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 RAB35Q15286 201 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TAF13Q15543 124 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ETFDHQ16134 617 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CDNFQ49AH0 187 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM27BQ5VT28 67 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 LHFPL1Q86WI0 220 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 DMRTC2Q8IXT2 367 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 OR5AS1Q8N127 324 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM123Q8N131 208 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TERB2Q8NHR7 220 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 SPTSSAQ969W0 71 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CPNE4Q96A23 557 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FGGYQ96C11 551 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 PLPPR2Q96GM1 343 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 C1orf147Q96MC9 270 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CITED4Q96RK1 184 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CHST5Q9GZS9 411 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 LPAR5Q9H1C0 372 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 RASL12Q9NYN1 266 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MRPL15Q9P015 296 aaKnown RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FOXD3Q9UJU5 478 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MRPS28Q9Y2Q9 187 aaKnown RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TRAV14DV4A0A0A6YYC5 116 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR5H14A6NHG9 310 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 M0R1B8 84 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CCL2P13500 99 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CPT2P23786 658 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 DTYMKP23919 212 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SLC6A9P48067 706 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CSNK1A1P48729 337 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 RAC3P60763 192 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 PCBD1P61457 104 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 FMODQ06828 376 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR8B8Q15620 311 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 TSPO2Q5TGU0 170 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 MOB3CQ70IA8 216 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 DPPA2Q7Z7J5 298 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 C20orf196Q8IYI0 205 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 GPR137CQ8N3F9 429 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR8B12Q8NGG6 310 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 COQ8AQ8NI60 647 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 THAP6Q8TBB0 222 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 EMG1Q92979 244 aaKnown RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 RNASE6Q93091 150 aaKnown RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM45BQ96B21 275 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 RAB3CQ96E17 227 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ADAT3Q96EY9 351 aaPredicted RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 LRRC46Q96FV0 321 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SLC6A7Q99884 636 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SMR3AQ99954 134 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SFXN3Q9BWM7 321 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM59Q9BXS4 323 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SDHAF2Q9NX18 166 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 FZR1Q9UM11 496 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 GPR132Q9UNW8 380 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 COL6A5A8TX70 2615 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 TEX13DA0A0J9YY54 714 aaPredicted RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 I3L521 148 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SIAH2O43255 324 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 NDUFS7O75251 213 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SFT2D2O95562 160 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 GPANK1O95872 356 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 HLA-AP01891 365 aaKnown RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 QDPRP09417 244 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CDKN1AP38936 164 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 GUCA2AQ02747 115 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SCRN3Q0VDG4 424 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 PLA2G7Q13093 441 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CNN3Q15417 329 aaKnown RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ALKBH6Q3KRA9 238 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF660Q6AZW8 331 aaPredicted RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR2A2Q6IF42 318 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 SLC22A25Q6T423 547 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 CFAP77Q6ZQR2 320 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 Q6ZS49 121 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 AAED1Q7RTV5 226 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF546Q86UE3 836 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ANGPTL5Q86XS5 388 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ZCCHC24Q8N2G6 241 aaKnown RBP4.1□□□□□ -1.75
EDEM3-203ENST00000439962 LRRC18Q8N456 261 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 BVESQ8NE79 360 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR5T2Q8NGG2 359 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR52N4Q8NGI2 321 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR4D10Q8NGI6 311 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 OR51A2Q8NGJ7 313 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ST8SIA2Q92186 375 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 ST8SIA4Q92187 359 aa4.1□□□□□ -1.75
EDEM3-203ENST00000439962 GCDHQ92947 438 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms