RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 MRPL41Q8IXM3 137 aaKnown RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 OR51H1Q8NH63 302 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 ST8SIA1Q92185 356 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 SPIN2AQ99865 258 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 GABRG3Q99928 467 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 SPIN2BQ9BPZ2 258 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 SEBOXQ9HB31 216 aaPredicted RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 ST3GAL6Q9Y274 331 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 LIPT2A6NK58 231 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 ZNHIT1O43257 154 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 ADAM20O43506 726 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 HOXC4P09017 264 aaPredicted RBP7.92□□□□□ -1.14
COPB1-202ENST00000439561 CFPP27918 469 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 HTR5AP47898 357 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 DYNLT3P51808 116 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 ZNF154Q13106 437 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 BATFQ16520 125 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 KHDC3LQ587J8 217 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 PLCXD3Q63HM9 321 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 KIAA0895LQ68EN5 471 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 LIAT1Q6ZQX7 453 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 LILRB2Q8N423 598 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 GJC3Q8NFK1 279 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 OR1L3Q8NH93 324 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 IL1F10Q8WWZ1 152 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 THOC3Q96J01 351 aaKnown RBP7.92□□□□□ -1.14
COPB1-202ENST00000439561 GNRHR2Q96P88 292 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 LMAN1LQ9HAT1 526 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 CD207Q9UJ71 328 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 HS3ST3A1Q9Y663 406 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 SHANK1Q9Y566 2161 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 ANKUB1A6NFN9 424 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 SRSF10O75494 262 aaKnown RBP7.92□□□□□ -1.14
COPB1-202ENST00000439561 IFI6P09912 130 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 TRGC1P0CF51 173 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 PGA4P0DJD7 388 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 PGA5P0DJD9 388 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 DDTP30046 118 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 HGFACQ04756 655 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 HEPN1Q6WQI6 88 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 RPUSD4Q96CM3 377 aaKnown RBP7.92□□□□□ -1.14
COPB1-202ENST00000439561 SHDQ96IW2 340 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 OR5B12Q96R08 314 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 TAAR9Q96RI9 348 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 DEFB126Q9BYW3 111 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 PLK3Q9H4B4 646 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 ZNF581Q9P0T4 197 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 PCNX3Q9H6A9 2034 aa7.92□□□□□ -1.14
COPB1-202ENST00000439561 FTCDNL1E5RQL4 147 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 NPIPB7O75200 414 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 IGHV2-5P01817 119 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 IGKV3-11P04433 115 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 S100GP29377 79 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 CD200P41217 278 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 TMEM267Q0VDI3 215 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 CXorf66Q5JRM2 361 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 ZNF385CQ66K41 422 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 RTL6Q6ICC9 239 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 Q6ZS52 159 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 OR10G3Q8NGC4 313 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 SGCZQ96LD1 299 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 LAMP3Q9UQV4 416 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 A0A0U1RQK1 487 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 DHRS3O75911 302 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 MMP7P09237 267 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 IAPPP10997 89 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 NDUFB7P17568 137 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 MSR1P21757 451 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 AADACP22760 399 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 ANOS1P23352 680 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 MNX1P50219 401 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 EFNA3P52797 238 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 SSTP61278 116 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HLA-DRB3P79483 266 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 DLX2Q07687 328 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 SMAD4Q13485 552 aaKnown RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 IL13RA2Q14627 380 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
COPB1-202ENST00000439561 LHFPL1Q86WI0 220 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 TSTD1Q8NFU3 115 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 NAT6Q93015 286 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 SMOC1Q9H4F8 434 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 TUBA4BQ9H853 241 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 CA14Q9ULX7 337 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 WASF3Q9UPY6 502 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 A0A1W2PQD3 144 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 TK1P04183 234 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 SERPINE2P07093 398 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 SOD3P08294 240 aa7.91□□□□□ -1.14
COPB1-202ENST00000439561 MLF1P58340 268 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms