RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 LIPT2A6NK58 231 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 DHRS7CA6NNS2 312 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 H3BQ15 152 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 TP53I11O14683 189 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 SOD3P08294 240 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 RPS23P62266 143 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 RPL23AP62750 156 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 VAMP2P63027 116 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 DLK1P80370 383 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 SMAD4Q13485 552 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 ISXQ2M1V0 245 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 MPV17LQ2QL34 196 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 KHDC3LQ587J8 217 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR8B12Q8NGG6 310 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 ULBP2Q9BZM5 246 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR10A2Q9H208 303 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF319Q9P2F9 582 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 ANKUB1A6NFN9 424 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 TSTD3H0UI37 97 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 FGF16O43320 207 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 IGHV2-70P01814 119 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 CCL3P10147 92 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 HIST1H1DP16402 221 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 TMEM50BP56557 158 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 ADIRFQ15847 76 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 RHBDD2Q6NTF9 364 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 SKA3Q8IX90 412 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR1J1Q8NGS3 322 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 ALX4Q9H161 411 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 SLC26A1Q9H2B4 701 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 TUBA4BQ9H853 241 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 WFDC1Q9HC57 220 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 C19orf25Q9UFG5 118 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 RBM7Q9Y580 266 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 HS3ST3B1Q9Y662 390 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 GTF3C1Q12789 2109 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 IGHV5-10-1A0A0J9YXX1 117 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 SMCO3A2RU48 225 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 ERVS71-1P61550 626 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZXDAP98168 799 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 TCEAL6Q6IPX3 200 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 SPEM1Q8N4L4 309 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF610Q8N9Z0 462 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR56B1Q8NGI3 324 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 IFI44Q8TCB0 444 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 NAT6Q93015 286 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF837Q96EG3 531 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 TCEAL7Q9BRU2 100 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 URM1Q9BTM9 101 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 LPAR5Q9H1C0 372 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 PISDQ9UG56 409 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 PIGLQ9Y2B2 252 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 UBE2J1Q9Y385 318 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 NCOA6Q14686 2063 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 NSG1A0A0A6YYJ2 146 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 TRAV39A0A0B4J263 110 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 MFNGO00587 321 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 UBE2CO00762 179 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR5H8P0DN80 308 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 B4GALT1P15291 398 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 MTCP1P56278 107 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 TRIM61Q5EBN2 209 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 CST9LP1Q5W188 147 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 Q8WTZ3 238 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 FRZBQ92765 325 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 HOXB13Q92826 284 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 RPUSD4Q96CM3 377 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 PRRG4Q9BZD6 226 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF442Q9H7R0 627 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 G6PC2Q9NQR9 355 aa8.69□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF587BE7ETH6 402 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 CDC14BO60729 498 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 CST4P01036 141 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 FCGR3AP08637 254 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 CCL2P13500 99 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 TAS2R31P59538 309 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 SLC35A1P78382 337 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF429Q86V71 674 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 HOGA1Q86XE5 327 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 CADM4Q8NFZ8 388 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 RTN4IP1Q8WWV3 396 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 AQP3Q92482 292 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 C14orf144Q96I85 54 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 RTBDNQ9BSG5 229 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 CALHM2Q9HA72 323 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 A0A096LPE4 126 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 A0A1W2PPZ6 126 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF705FA8MVS1 300 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 TCAPO15273 167 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR7C1O76099 320 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 MBPP02686 304 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF705DP0CH99 300 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF705BP0CI00 300 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 ERVFRD-1P60508 538 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 SPEM2Q0P670 501 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 TMEM268Q5VZI3 342 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR51H1Q8NH63 302 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 ST8SIA1Q92185 356 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 SPACA9Q96E40 222 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms