RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MAGT1Q9H0U3 335 aa11.82□□□□□ -0.52
PCNX3-202ENST00000439247 PNRC2Q9NPJ4 139 aaKnown RBP11.82□□□□□ -0.52
PCNX3-202ENST00000439247 GFOD1Q9NXC2 390 aa11.82□□□□□ -0.52
PCNX3-202ENST00000439247 FER1L5A0AVI2 2057 aa11.82□□□□□ -0.52
PCNX3-202ENST00000439247 CEP192Q8TEP8 1941 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 TNFSF12O43508 249 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 SPRY1O43609 319 aaPredicted RBP11.81□□□□□ -0.52
PCNX3-202ENST00000439247 CD38P28907 300 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 MAS1LP35410 378 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 RAB1AP62820 205 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 RUNX1Q01196 453 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 UFSP2Q9NUQ7 469 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 BLACEA4D250 179 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 F10P00742 488 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 HIST1H1BP16401 226 aaKnown RBP11.81□□□□□ -0.52
PCNX3-202ENST00000439247 ATP6V0CP27449 155 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 CAPZBP47756 277 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 ABCA11PQ4W5N1 156 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 HIST3H2BBQ8N257 126 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 ABHD5Q8WTS1 349 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 MRPL13Q9BYD1 178 aaKnown RBP11.81□□□□□ -0.52
PCNX3-202ENST00000439247 FAM86C1Q9NVL1 165 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 ANXA10Q9UJ72 324 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 KCNIP3Q9Y2W7 256 aa11.81□□□□□ -0.52
PCNX3-202ENST00000439247 GALNSP34059 522 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 AFF3P51826 1226 aaKnown RBP11.8□□□□□ -0.52
PCNX3-202ENST00000439247 EWSR1Q01844 656 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCNX3-202ENST00000439247 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 CADM4Q8NFZ8 388 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 FRZBQ92765 325 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 OPA3Q9H6K4 179 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 TRGC1P0CF51 173 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 ZP4Q12836 540 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 MYBPHQ13203 477 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 OR2T2Q6IF00 324 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 TMEM217Q8N7C4 229 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 TMEM105Q8N8V8 129 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 TMEM171Q8WVE6 324 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 PGAM5Q96HS1 289 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 S100A13Q99584 98 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 NAA60Q9H7X0 242 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 FSCN3Q9NQT6 498 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 COPS7AQ9UBW8 275 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 AK3Q9UIJ7 227 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 CABIN1Q9Y6J0 2220 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 ZNF724A8MTY0 619 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 SRP19P09132 144 aaKnown RBP11.8□□□□□ -0.52
PCNX3-202ENST00000439247 ZNF728P0DKX0 622 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 EPHA1P21709 976 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 RBP2P50120 134 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 HIKESHIQ53FT3 197 aa11.8□□□□□ -0.52
PCNX3-202ENST00000439247 FIP1L1Q6UN15 594 aaKnown RBP11.8□□□□□ -0.52
PCNX3-202ENST00000439247 IGSF23A1L1A6 192 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 OR5H15A6NDH6 313 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 PPP1R2P9O14990 202 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 PHF1O43189 567 aaPredicted RBP11.79□□□□□ -0.52
PCNX3-202ENST00000439247 CST7O76096 145 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 PGA4P0DJD7 388 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 PGA3P0DJD8 388 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 TDGF1P13385 188 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 LRRC18Q8N456 261 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 OR1N1Q8NGS0 311 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 SLC2A9Q9NRM0 540 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 A0A087X0M5 115 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 A0A1B0GX30 115 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 SEC14L6B5MCN3 397 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 PLA2G5P39877 138 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 SUCLG1P53597 346 aaKnown RBP11.79□□□□□ -0.52
PCNX3-202ENST00000439247 DOK3Q7L591 496 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 SLC35G3Q8N808 338 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 SLC38A9Q8NBW4 561 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 GPR173Q9NS66 373 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 SLC7A11Q9UPY5 501 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 PIGLQ9Y2B2 252 aa11.79□□□□□ -0.52
PCNX3-202ENST00000439247 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
PCNX3-202ENST00000439247 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 ZNF587BE7ETH6 402 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
PCNX3-202ENST00000439247 DDTP30046 118 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 SFTPDP35247 375 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 NKX6-1P78426 367 aaPredicted RBP11.78□□□□□ -0.52
PCNX3-202ENST00000439247 ICAM4Q14773 271 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 Q3ZCU0 254 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 TP53RKQ96S44 253 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 CRLF2Q9HC73 371 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 NKX2-6A6NCS4 301 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 TLCD2A6NGC4 264 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 ST8SIA3O43173 380 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 NOXO1Q8NFA2 376 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 TMEM234Q8WY98 164 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 MSI2Q96DH6 328 aaKnown RBP11.78□□□□□ -0.52
PCNX3-202ENST00000439247 BOD1Q96IK1 185 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 SSX3Q99909 188 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 HSF4Q9ULV5 492 aa11.78□□□□□ -0.52
PCNX3-202ENST00000439247 SSTP61278 116 aa11.77□□□□□ -0.52
PCNX3-202ENST00000439247 THEM4Q5T1C6 240 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms