RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 MED30Q96HR3 178 aa8.94□□□□□ -0.98
CSTF3-203ENST00000438862 ZNF649Q9BS31 505 aa8.94□□□□□ -0.98
CSTF3-203ENST00000438862 MROQ9BYG7 248 aa8.94□□□□□ -0.98
CSTF3-203ENST00000438862 ABCB10Q9NRK6 738 aa8.94□□□□□ -0.98
CSTF3-203ENST00000438862 MRPL15Q9P015 296 aaKnown RBP8.94□□□□□ -0.98
CSTF3-203ENST00000438862 ERGIC3Q9Y282 383 aa8.94□□□□□ -0.98
CSTF3-203ENST00000438862 A0A1W2PQL4 384 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 DAPL1A0PJW8 107 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 ACOD1A6NK06 481 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 H3BUI4 141 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 RPSAP08865 295 aaKnown RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 MRPL3P09001 348 aaKnown RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 OTX1P32242 354 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 NAA10P41227 235 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 RAB13P51153 203 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 GRB2P62993 217 aaKnown RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 EIF2B1Q14232 305 aaKnown RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 IRF3Q14653 427 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 MEP1BQ16820 701 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 ZNF684Q5T5D7 378 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 LCE1DQ5T752 114 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 ZNF322Q6U7Q0 402 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 TMPRSS11AQ6ZMR5 421 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 AHSA2Q719I0 299 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 MRPL21Q7Z2W9 205 aaKnown RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 OR10H4Q8NGA5 316 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 OR52N1Q8NH53 320 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 RPS4Y2Q8TD47 263 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 THEM6Q8WUY1 208 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 LRRC29Q8WV35 223 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 SLAMF6Q96DU3 332 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 OR8B4Q96RC9 309 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 SP140LQ9H930 580 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 PNRC2Q9NPJ4 139 aaKnown RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 ERVK13-1Q9NX77 482 aa8.93□□□□□ -0.98
CSTF3-203ENST00000438862 SLC25A10Q9UBX3 287 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-203ENST00000438862 HUWE1Q7Z6Z7 4374 aaKnown RBP8.92□□□□□ -0.98
CSTF3-203ENST00000438862 A0A087WXM4 84 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 MAGEA13PA6NCF6 341 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 METTL15A6NJ78 407 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 LCATP04180 440 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 KRT8P05787 483 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 ACSM4P0C7M7 580 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 LIMS3P0CW19 117 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 LIMS4P0CW20 117 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 AMY2BP19961 511 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 C21orf33P30042 268 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-203ENST00000438862 OPRL1P41146 370 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 THBS3P49746 956 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 CAV3P56539 151 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 ZNF85Q03923 595 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 TBCEQ15813 527 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-203ENST00000438862 TMEM95Q3KNT9 176 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 KRTAP27-1Q3LI81 207 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 ZNF773Q6PK81 442 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 KRT77Q7Z794 578 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 TMEM219Q86XT9 240 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-203ENST00000438862 LINC00346Q8IVM7 164 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 NANOGP1Q8N7R0 232 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 SPTSSAQ969W0 71 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 KCNJ15Q99712 375 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 ATF6BQ99941 703 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 ALG8Q9BVK2 526 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 KRTAP4-7Q9BYR0 210 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 PAK1IP1Q9NWT1 392 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-203ENST00000438862 COPS3Q9UNS2 423 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 SNX5Q9Y5X3 404 aa8.92□□□□□ -0.98
CSTF3-203ENST00000438862 GGT3PA6NGU5 568 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 FAM90A8PA6NJQ4 464 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 TRIM64CA6NLI5 447 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 F5H5K5 113 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-203ENST00000438862 H2BFMP0C1H6 154 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 NDUFB7P17568 137 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 DYNLT3P51808 116 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 RIDAP52758 137 aaKnown RBP8.91□□□□□ -0.98
CSTF3-203ENST00000438862 TPTEP56180 551 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 BDH1Q02338 343 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 CCDC58Q4VC31 144 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 KHDC1LQ5JSQ8 128 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 STUMQ69YW2 141 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 FDX2Q6P4F2 183 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 CORO6Q6QEF8 472 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 DRAM2Q6UX65 266 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 CFAP77Q6ZQR2 320 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 ZNF788Q6ZQV5 615 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-203ENST00000438862 LHFPL3Q86UP9 236 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 C11orf53Q8IXP5 236 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 ZNF485Q8NCK3 441 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 OR52H1Q8NGJ2 320 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 FCGR1BQ92637 280 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 FOXRED1Q96CU9 486 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-203ENST00000438862 MALSU1Q96EH3 234 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 CITED4Q96RK1 184 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 MND1Q9BWT6 205 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 ISYNA1Q9NPH2 558 aa8.91□□□□□ -0.98
CSTF3-203ENST00000438862 BABAM2Q9NXR7 383 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms