RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 FAM90A20PA6NIJ5 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM90A9PA6NNJ1 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM90A12PA8MX19 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM90A5PA8MXJ8 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 LY6LH3BQJ8 138 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 ELANEP08246 267 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM90A15PP0C7V4 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM90A13PP0C7W8 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM90A14PP0C7W9 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM90A24PP0C7X0 464 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 FAM106CPP0CH98 169 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 ARSBP15848 533 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 ARHGDIBP52566 201 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 CYBRD1Q53TN4 286 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 UTF1Q5T230 341 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 ASCC1Q8N9N2 400 aaKnown RBP9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 POC1AQ8NBT0 407 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 RSRC1Q96IZ7 334 aaKnown RBP9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 HIPK2Q9H2X6 1198 aa9.47□□□□□ -0.89
SMAD9-IT1-201ENST00000437983 I3L521 148 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ANGPT2O15123 496 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CCDC22O60826 627 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF737O75373 536 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IGLV1-47P01700 117 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SPARCP09486 303 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OSMP13725 252 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IFNA8P32881 189 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GDNFP39905 211 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF121P58317 390 aaPredicted RBP9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GNG3P63215 75 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF616Q08AN1 781 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 PMS2P11Q13670 270 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GALEQ14376 348 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 EDDM3AQ14507 147 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 PRAMEF5Q5TYX0 476 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZBTB49Q6ZSB9 765 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 FTMTQ8N4E7 242 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OR51L1Q8NGJ5 315 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OR56B4Q8NH76 319 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ARPC1AQ92747 370 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HIST1H2AAQ96QV6 131 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 NRIP2Q9BQI9 281 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SLC22A13Q9Y226 551 aa9.46□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 C12orf77C9JDV5 145 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF878C9JN71 531 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 BUB1B-PAK6H3BSN5 160 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 AP4M1O00189 453 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 PSMD9O00233 223 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TMEM11P17152 192 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CFL1P23528 166 aaKnown RBP9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GPR12P47775 334 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SLURP1P55000 103 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CFHR3Q02985 330 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 KIAA0141Q14154 515 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HES1Q14469 280 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 MAPRE2Q15555 327 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 LRRC23Q53EV4 343 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GDPD3Q7L5L3 318 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TRMT10AQ8TBZ6 339 aaKnown RBP9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OR10A2Q9H208 303 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF286AQ9HBT8 521 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ABCB9Q9NP78 766 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 MRGBPQ9NV56 204 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ARL2BPQ9Y2Y0 163 aa9.45□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 hADV38S2A0JD32 116 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 DHRS12A0PJE2 317 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 UNC119BA6NIH7 251 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 MRASO14807 208 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 FGF16O43320 207 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 NXPH2O95156 264 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 FAM107AO95990 144 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IGHG4P01861 327 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 PSMB8P28062 276 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 MNDAP41218 407 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OMPP47874 163 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ESRRGP62508 458 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 MEF2CQ06413 473 aaPredicted RBP9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SNCBQ16143 134 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CEACAM21Q3KPI0 293 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ACSM6Q6P461 480 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 RRM2BQ7LG56 351 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 VTCN1Q7Z7D3 282 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF596Q8TC21 504 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ITFG2Q969R8 447 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 EME1Q96AY2 570 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TMED9Q9BVK6 235 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ALX4Q9H161 411 aaPredicted RBP9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 KLK15Q9H2R5 256 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TMEM5Q9Y2B1 443 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 COMMD3-BMI1R4GMX3 469 aa9.44□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CXorf65A6NEN9 183 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF593O00488 134 aaPredicted RBP9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 COX4I1P13073 169 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HSD11B1P28845 292 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GRB2P62993 217 aaKnown RBP9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CBX1P83916 185 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CYLC2Q14093 348 aaPredicted RBP9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 DIAPH2-AS1Q14236 149 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 RBM39Q14498 530 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms